EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018208 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 140835 bases
Position: chr11:47960565-48101399
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0028745	MMR_HSR1	PF01926.23	5.3e-11	1	1
MGP_129S1SvImJ_P0028740	MMR_HSR1	PF01926.23	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0028740	-	780	-	MGP_129S1SvImJ_P0028740	160 (aa)	-	-
MGP_129S1SvImJ_T0028745	-	2012	-	MGP_129S1SvImJ_P0028745	458 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018208	-	68	35.043	MGP_129S1SvImJ_G0031828	Irgc1	71	34.242
MGP_129S1SvImJ_G0018208	-	53	37.209	MGP_129S1SvImJ_G0018345	Igtp	57	34.274
MGP_129S1SvImJ_G0018208	-	55	38.636	MGP_129S1SvImJ_G0018346	Irgm2	62	36.400
MGP_129S1SvImJ_G0018208	-	99	39.759	MGP_129S1SvImJ_G0024458	Gm4951	99	39.379
MGP_129S1SvImJ_G0018208	-	99	40.361	MGP_129S1SvImJ_G0024459	F830016B08Rik	97	40.573
MGP_129S1SvImJ_G0018208	-	86	99.270	MGP_129S1SvImJ_G0018213	-	99	99.270
MGP_129S1SvImJ_G0018208	-	99	91.411	MGP_129S1SvImJ_G0018212	-	85	100.000
MGP_129S1SvImJ_G0018208	-	99	91.411	MGP_129S1SvImJ_G0018211	-	85	100.000
MGP_129S1SvImJ_G0018208	-	75	37.995	MGP_129S1SvImJ_G0018216	Ifi47	90	37.995
MGP_129S1SvImJ_G0018208	-	81	46.944	MGP_129S1SvImJ_G0018215	Tgtp2	98	46.944
MGP_129S1SvImJ_G0018208	-	73	31.909	MGP_129S1SvImJ_G0018207	Irgm1	83	38.367