EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018212 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 16705 bases
Position: chr11:48032407-48049111
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0028744	MMR_HSR1	PF01926.23	5.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0028744	-	3661	-	MGP_129S1SvImJ_P0028744	463 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018212	-	66	34.242	MGP_129S1SvImJ_G0031828	Irgc1	71	34.242
MGP_129S1SvImJ_G0018212	-	52	34.146	MGP_129S1SvImJ_G0018345	Igtp	57	34.274
MGP_129S1SvImJ_G0018212	-	53	36.400	MGP_129S1SvImJ_G0018346	Irgm2	62	36.400
MGP_129S1SvImJ_G0018212	-	100	100.000	MGP_129S1SvImJ_G0018211	-	100	100.000
MGP_129S1SvImJ_G0018212	-	74	37.995	MGP_129S1SvImJ_G0018216	Ifi47	90	37.995
MGP_129S1SvImJ_G0018212	-	78	47.368	MGP_129S1SvImJ_G0018215	Tgtp2	96	47.368
MGP_129S1SvImJ_G0018212	-	83	40.573	MGP_129S1SvImJ_G0024459	F830016B08Rik	97	40.573
MGP_129S1SvImJ_G0018212	-	84	39.379	MGP_129S1SvImJ_G0024458	Gm4951	99	39.379
MGP_129S1SvImJ_G0018212	-	85	100.000	MGP_129S1SvImJ_G0018208	-	99	91.411
MGP_129S1SvImJ_G0018212	-	72	31.909	MGP_129S1SvImJ_G0018207	Irgm1	83	38.367