EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018236 (Gene tree)
Gene ID: -
Gene Symbol: Cnot6
Alias: A230103N10Rik|CCR4|Ccr4|Kiaa1194
Full Name: CCR4-NOT transcription complex%2C subunit 6
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 45485 bases
Position: chr11:48810670-48856154
Accession: 2144529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0028808	Exo_endo_phos	PF03372.23	6.9e-22	1	1
MGP_129S1SvImJ_P0028806	Exo_endo_phos	PF03372.23	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0028808	-	2498	-	MGP_129S1SvImJ_P0028808	552 (aa)	-	-
MGP_129S1SvImJ_T0028809	-	600	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0028806	-	5736	XM_006531940	MGP_129S1SvImJ_P0028806	557 (aa)	XP_006532003	Q8K3P5
MGP_129S1SvImJ_T0028807	-	2241	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0028810	-	830	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018236	Cnot6	100	77.355	MGP_129S1SvImJ_G0029763	Cnot6l	100	77.355