EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018255 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 14641 bases
Position: chr11:50067516-50082156
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	1	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	2	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	3	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	4	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	5	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	6	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	7	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	8	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	9	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	10	11
MGP_129S1SvImJ_P0028895	zf-C2H2	PF00096.26	7.8e-63	11	11
MGP_129S1SvImJ_P0028895	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0028895	-	1611	XM_006533208	MGP_129S1SvImJ_P0028895	536 (aa)	XP_006533271	Q5NCH5
MGP_129S1SvImJ_T0028897	-	722	-	MGP_129S1SvImJ_P0028897	122 (aa)	-	-
MGP_129S1SvImJ_T0028896	-	579	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0028898	-	606	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018255	Zfp454	67	51.309	MGP_129S1SvImJ_G0031568	Zfp628	60	49.451
MGP_129S1SvImJ_G0018255	Zfp454	75	42.982	MGP_129S1SvImJ_G0024602	Zfp236	63	42.697
MGP_129S1SvImJ_G0018255	Zfp454	68	38.320	MGP_129S1SvImJ_G0018349	Zfp672	90	42.029
MGP_129S1SvImJ_G0018255	Zfp454	99	49.315	MGP_129S1SvImJ_G0023227	Zfp677	99	49.315
MGP_129S1SvImJ_G0018255	Zfp454	99	52.198	MGP_129S1SvImJ_G0032116	Zfp141	99	52.198
MGP_129S1SvImJ_G0018255	Zfp454	87	48.199	MGP_129S1SvImJ_G0032117	Zfp715	61	57.778
MGP_129S1SvImJ_G0018255	Zfp454	65	42.424	MGP_129S1SvImJ_G0029048	Zbtb17	55	43.322
MGP_129S1SvImJ_G0018255	Zfp454	65	36.493	MGP_129S1SvImJ_G0031579	Zfp784	71	36.493
MGP_129S1SvImJ_G0018255	Zfp454	67	42.623	MGP_129S1SvImJ_G0031576	Zfp865	80	36.486
MGP_129S1SvImJ_G0018255	Zfp454	68	45.745	MGP_129S1SvImJ_G0026930	Zfp64	73	35.125
MGP_129S1SvImJ_G0018255	Zfp454	69	37.600	MGP_129S1SvImJ_G0033983	Zfp319	91	37.989
MGP_129S1SvImJ_G0018255	Zfp454	69	54.618	MGP_129S1SvImJ_G0020719	Zfp65	98	54.618
MGP_129S1SvImJ_G0018255	Zfp454	68	42.262	MGP_129S1SvImJ_G0029844	Gfi1	100	45.794
MGP_129S1SvImJ_G0018255	Zfp454	68	51.095	MGP_129S1SvImJ_G0033032	Zfp768	51	50.523
MGP_129S1SvImJ_G0018255	Zfp454	98	50.523	MGP_129S1SvImJ_G0031823	Zfp94	97	50.523
MGP_129S1SvImJ_G0018255	Zfp454	76	53.448	MGP_129S1SvImJ_G0031822	Zfp61	59	66.667
MGP_129S1SvImJ_G0018255	Zfp454	98	50.836	MGP_129S1SvImJ_G0031820	Zfp108	99	50.836
MGP_129S1SvImJ_G0018255	Zfp454	100	55.556	MGP_129S1SvImJ_G0026463	Zfp661	98	55.405
MGP_129S1SvImJ_G0018255	Zfp454	98	48.828	MGP_129S1SvImJ_G0034143	Zfp1	99	48.828
MGP_129S1SvImJ_G0018255	Zfp454	82	36.599	MGP_129S1SvImJ_G0030700	Repin1	92	35.252
MGP_129S1SvImJ_G0018255	Zfp454	99	53.604	MGP_129S1SvImJ_G0022013	Zfp251	95	51.948
MGP_129S1SvImJ_G0018255	Zfp454	98	46.667	MGP_129S1SvImJ_G0034481	Zfp872	99	46.667
MGP_129S1SvImJ_G0018255	Zfp454	98	47.879	MGP_129S1SvImJ_G0018399	Zfp867	96	49.583
MGP_129S1SvImJ_G0018255	Zfp454	86	52.000	MGP_129S1SvImJ_G0020698	Rslcan18	87	52.000
MGP_129S1SvImJ_G0018255	Zfp454	98	45.553	MGP_129S1SvImJ_G0020699	Zfp759	100	46.821
MGP_129S1SvImJ_G0018255	Zfp454	98	43.928	MGP_129S1SvImJ_G0026892	Zfp334	99	44.615
MGP_129S1SvImJ_G0018255	Zfp454	70	35.714	MGP_129S1SvImJ_G0031853	Zfp574	88	37.500
MGP_129S1SvImJ_G0018255	Zfp454	69	39.130	MGP_129S1SvImJ_G0018987	Zfp652	56	38.596
MGP_129S1SvImJ_G0018255	Zfp454	65	47.423	MGP_129S1SvImJ_G0029507	Zbtb49	63	50.000
MGP_129S1SvImJ_G0018255	Zfp454	98	49.014	MGP_129S1SvImJ_G0033764	Zfp709	99	49.014
MGP_129S1SvImJ_G0018255	Zfp454	98	41.509	MGP_129S1SvImJ_G0033765	Zfp882	99	44.110
MGP_129S1SvImJ_G0018255	Zfp454	99	44.019	MGP_129S1SvImJ_G0033035	E430018J23Rik	89	45.385
MGP_129S1SvImJ_G0018255	Zfp454	66	55.426	MGP_129S1SvImJ_G0020717	-	90	55.426
MGP_129S1SvImJ_G0018255	Zfp454	98	50.142	MGP_129S1SvImJ_G0020716	Zfp748	100	50.142
MGP_129S1SvImJ_G0018255	Zfp454	69	60.345	MGP_129S1SvImJ_G0031178	Zfp637	80	55.208
MGP_129S1SvImJ_G0018255	Zfp454	71	57.514	MGP_129S1SvImJ_G0031990	Zfp420	98	59.532
MGP_129S1SvImJ_G0018255	Zfp454	100	50.847	MGP_129S1SvImJ_G0023229	Zfp51	96	50.847
MGP_129S1SvImJ_G0018255	Zfp454	82	57.778	MGP_129S1SvImJ_G0031816	Zfp235	78	57.778
MGP_129S1SvImJ_G0018255	Zfp454	98	49.008	MGP_129S1SvImJ_G0031815	Zfp112	72	57.143
MGP_129S1SvImJ_G0018255	Zfp454	70	41.854	MGP_129S1SvImJ_G0023258	Zscan10	75	44.554
MGP_129S1SvImJ_G0018255	Zfp454	99	46.361	MGP_129S1SvImJ_G0023250	Zfp945	99	46.479
MGP_129S1SvImJ_G0018255	Zfp454	68	38.571	MGP_129S1SvImJ_G0030834	Prdm5	78	38.571