EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018280 (Gene tree)
Gene ID: -
Gene Symbol: Cdkl3
Alias: AI852479|B230379H01Rik
Full Name: cyclin-dependent kinase-like 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 97387 bases
Position: chr11:51288485-51385871
Accession: 2388268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0028985	RIO1	PF01163.22	4.4e-05	1	1
MGP_129S1SvImJ_P0028983	RIO1	PF01163.22	0.00027	1	1
MGP_129S1SvImJ_P0028988	RIO1	PF01163.22	0.00035	1	1
MGP_129S1SvImJ_P0028982	RIO1	PF01163.22	0.00035	1	1
MGP_129S1SvImJ_P0028984	RIO1	PF01163.22	0.00035	1	1
MGP_129S1SvImJ_P0028979	RIO1	PF01163.22	0.00035	1	1
MGP_129S1SvImJ_P0028980	RIO1	PF01163.22	0.00035	1	1
MGP_129S1SvImJ_P0028981	RIO1	PF01163.22	0.00037	1	1
MGP_129S1SvImJ_P0028987	RIO1	PF01163.22	0.00037	1	1
MGP_129S1SvImJ_P0028978	RIO1	PF01163.22	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0028990	-	513	-	MGP_129S1SvImJ_P0028990	137 (aa)	-	-
MGP_129S1SvImJ_T0028985	-	665	-	MGP_129S1SvImJ_P0028985	192 (aa)	-	-
MGP_129S1SvImJ_T0028991	-	631	-	MGP_129S1SvImJ_P0028991	97 (aa)	-	-
MGP_129S1SvImJ_T0028984	-	2008	-	MGP_129S1SvImJ_P0028984	581 (aa)	-	-
MGP_129S1SvImJ_T0028992	-	489	-	MGP_129S1SvImJ_P0028992	79 (aa)	-	-
MGP_129S1SvImJ_T0028993	-	467	-	MGP_129S1SvImJ_P0028993	91 (aa)	-	-
MGP_129S1SvImJ_T0028983	-	2216	-	MGP_129S1SvImJ_P0028983	457 (aa)	-	-
MGP_129S1SvImJ_T0028982	-	2051	-	MGP_129S1SvImJ_P0028982	581 (aa)	-	-
MGP_129S1SvImJ_T0028981	-	2749	-	MGP_129S1SvImJ_P0028981	610 (aa)	-	-
MGP_129S1SvImJ_T0028980	-	2387	-	MGP_129S1SvImJ_P0028980	585 (aa)	-	-
MGP_129S1SvImJ_T0028987	-	2770	-	MGP_129S1SvImJ_P0028987	610 (aa)	-	-
MGP_129S1SvImJ_T0028986	-	2769	-	MGP_129S1SvImJ_P0028986	591 (aa)	-	-
MGP_129S1SvImJ_T0028978	-	2765	XM_006532767	MGP_129S1SvImJ_P0028978	595 (aa)	XP_006532830	Q8BLF2
MGP_129S1SvImJ_T0028979	-	2063	-	MGP_129S1SvImJ_P0028979	585 (aa)	-	-
MGP_129S1SvImJ_T0028989	-	1564	-	MGP_129S1SvImJ_P0028989	224 (aa)	-	-
MGP_129S1SvImJ_T0028988	-	2040	-	MGP_129S1SvImJ_P0028988	597 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018280	Cdkl3	69	33.835	MGP_129S1SvImJ_G0028009	-	56	32.692
MGP_129S1SvImJ_G0018280	Cdkl3	88	33.721	MGP_129S1SvImJ_G0024789	Mark2	87	33.721
MGP_129S1SvImJ_G0018280	Cdkl3	90	35.556	MGP_129S1SvImJ_G0029799	Mapk10	84	37.908