EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018546 (Gene tree)
Gene ID: -
Gene Symbol: Eif4a1
Alias: BM-010|Ddx2a|Eif4|Eif4a|initiation factor eIF-4A long form
Full Name: eukaryotic translation initiation factor 4A1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 7596 bases
Position: chr11:70123842-70131437
Accession: 95303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0030028	ResIII	PF04851.15	9.6e-07	1	1
MGP_129S1SvImJ_P0030028	DEAD	PF00270.29	5.1e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0030038	-	802	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030029	-	3051	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030028	-	1658	-	MGP_129S1SvImJ_P0030028	380 (aa)	-	-
MGP_129S1SvImJ_T0030032	-	813	-	MGP_129S1SvImJ_P0030032	50 (aa)	-	-
MGP_129S1SvImJ_T0030033	-	403	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030030	-	354	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030031	-	672	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030036	-	401	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030037	-	453	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030034	-	493	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030035	-	484	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030027	-	1729	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018546	Eif4a1	94	65.922	MGP_129S1SvImJ_G0019478	Eif4a3	98	60.000
MGP_129S1SvImJ_G0018546	Eif4a1	86	37.500	MGP_129S1SvImJ_G0034714	Ddx6	67	37.500
MGP_129S1SvImJ_G0018546	Eif4a1	89	35.756	MGP_129S1SvImJ_G0033839	Ddx39	84	39.655
MGP_129S1SvImJ_G0018546	Eif4a1	86	30.321	MGP_129S1SvImJ_G0020602	Ddx41	55	30.321
MGP_129S1SvImJ_G0018546	Eif4a1	94	90.223	MGP_129S1SvImJ_G0022678	Eif4a2	99	89.916
MGP_129S1SvImJ_G0018546	Eif4a1	86	41.520	MGP_129S1SvImJ_G0034536	Ddx25	69	41.520
MGP_129S1SvImJ_G0018546	Eif4a1	88	32.951	MGP_129S1SvImJ_G0019313	Ddx5	78	31.498
MGP_129S1SvImJ_G0018546	Eif4a1	60	30.435	MGP_129S1SvImJ_G0018018	Ddx56	97	30.041
MGP_129S1SvImJ_G0018546	Eif4a1	86	33.036	MGP_129S1SvImJ_G0022077	Ddx17	51	33.036
MGP_129S1SvImJ_G0018546	Eif4a1	91	30.836	MGP_129S1SvImJ_G0031412	Ddx47	75	30.836
MGP_129S1SvImJ_G0018546	Eif4a1	86	32.295	MGP_129S1SvImJ_G0016921	D1Pas1	53	32.578
MGP_129S1SvImJ_G0018546	Eif4a1	90	30.769	MGP_129S1SvImJ_G0030100	Ddx55	58	30.769
MGP_129S1SvImJ_G0018546	Eif4a1	86	31.778	MGP_129S1SvImJ_G0017303	Ddx50	50	31.884
MGP_129S1SvImJ_G0018546	Eif4a1	86	32.335	MGP_129S1SvImJ_G0033699	Ddx49	94	32.335
MGP_129S1SvImJ_G0018546	Eif4a1	91	36.080	MGP_129S1SvImJ_G0023633	Ddx39b	82	36.080
MGP_129S1SvImJ_G0018546	Eif4a1	87	31.287	MGP_129S1SvImJ_G0035068	Ddx43	52	31.287
MGP_129S1SvImJ_G0018546	Eif4a1	86	32.295	MGP_129S1SvImJ_G0035571	Ddx3x	53	32.578
MGP_129S1SvImJ_G0018546	Eif4a1	51	46.465	MGP_129S1SvImJ_G0034133	Ddx19b	58	46.465
MGP_129S1SvImJ_G0018546	Eif4a1	66	37.091	MGP_129S1SvImJ_G0034132	Ddx19a	75	37.091