EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
Description
Ensembl ID
MGP_129S1SvImJ_G0018703 (Gene tree)
Gene ID
-
Gene Symbol
Smg6
Alias
AI317223|AU041178|Est1a|Kiaa0732
Full Name
Smg-6 homolog%2C nonsense mediated mRNA decay factor (C. elegans)
Gene Type
protein_coding
Species
Mus_musculus_129s1svimj
Status
putative
Strand
Plus strand
Length
253434 bases
Position
chr11:75642636-75896069
Accession
2144117
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_129S1SvImJ_P0030676EST1PF10374.98.5e-1411
MGP_129S1SvImJ_P0030676EST1_DNA_bindPF10373.92.6e-6011
MGP_129S1SvImJ_P0030679EST1_DNA_bindPF10373.91.4e-1011
MGP_129S1SvImJ_P0030676PIN_4PF13638.61.9e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_129S1SvImJ_T0030676-5849XM_011248659MGP_129S1SvImJ_P00306761418 (aa)XP_011246961P61406
MGP_129S1SvImJ_T0030677-4079-MGP_129S1SvImJ_P0030677355 (aa)--
MGP_129S1SvImJ_T0030678-2200--- (aa)--
MGP_129S1SvImJ_T0030681-626--- (aa)--
MGP_129S1SvImJ_T0030679-714-MGP_129S1SvImJ_P0030679238 (aa)--
MGP_129S1SvImJ_T0030680-487--- (aa)--
Gene Model
Click here to download MGP_129S1SvImJ_G0018703's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018703's network

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us