EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018767 (Gene tree)
Gene ID: -
Gene Symbol: Rpl23a
Alias: BC029892|MDA20
Full Name: ribosomal protein L23A
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 2653 bases
Position: chr11:79162562-79165214
Accession: 3040672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0030987	Ribosomal_L23	PF00276.20	8.8e-16	1	1
MGP_129S1SvImJ_P0030987	Ribosomal_L23eN	PF03939.13	1.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0030986	-	503	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0030987	-	560	-	MGP_129S1SvImJ_P0030987	156 (aa)	-	-
MGP_129S1SvImJ_T0030985	-	588	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018767's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018767	Rpl23a	100	78.846	MGP_129S1SvImJ_G0032076	Gm6096	83	79.365
MGP_129S1SvImJ_G0018767	Rpl23a	63	63.636	MGP_129S1SvImJ_G0020803	Gm21726	82	63.636