EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018863 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 21962 bases
Position: chr11:85333256-85355217
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0031316	ResIII	PF04851.15	9.9e-06	1	1
MGP_129S1SvImJ_P0031316	DEAD	PF00270.29	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0031316	-	3194	-	MGP_129S1SvImJ_P0031316	598 (aa)	-	Q8K301
MGP_129S1SvImJ_T0031317	-	553	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018863	Ddx52	63	31.915	MGP_129S1SvImJ_G0034714	Ddx6	76	31.915
MGP_129S1SvImJ_G0018863	Ddx52	68	31.935	MGP_129S1SvImJ_G0016412	Ddx18	55	32.990
MGP_129S1SvImJ_G0018863	Ddx52	70	32.045	MGP_129S1SvImJ_G0035571	Ddx3x	61	32.530
MGP_129S1SvImJ_G0018863	Ddx52	69	34.135	MGP_129S1SvImJ_G0035068	Ddx43	63	34.135
MGP_129S1SvImJ_G0018863	Ddx52	60	41.071	MGP_129S1SvImJ_G0019605	Ddx1	55	41.071
MGP_129S1SvImJ_G0018863	Ddx52	58	33.428	MGP_129S1SvImJ_G0031412	Ddx47	83	32.011
MGP_129S1SvImJ_G0018863	Ddx52	66	31.204	MGP_129S1SvImJ_G0019313	Ddx5	76	31.204
MGP_129S1SvImJ_G0018863	Ddx52	68	30.456	MGP_129S1SvImJ_G0022077	Ddx17	62	30.843
MGP_129S1SvImJ_G0018863	Ddx52	70	30.222	MGP_129S1SvImJ_G0022305	Ddx23	54	30.243
MGP_129S1SvImJ_G0018863	Ddx52	66	34.069	MGP_129S1SvImJ_G0020938	Ddx4	57	34.069
MGP_129S1SvImJ_G0018863	Ddx52	62	30.750	MGP_129S1SvImJ_G0030100	Ddx55	61	30.750
MGP_129S1SvImJ_G0018863	Ddx52	68	30.733	MGP_129S1SvImJ_G0020602	Ddx41	65	31.026
MGP_129S1SvImJ_G0018863	Ddx52	61	30.597	MGP_129S1SvImJ_G0018018	Ddx56	80	33.493
MGP_129S1SvImJ_G0018863	Ddx52	58	30.900	MGP_129S1SvImJ_G0029890	Ddx51	64	30.900
MGP_129S1SvImJ_G0018863	Ddx52	66	32.530	MGP_129S1SvImJ_G0016921	D1Pas1	61	32.530
MGP_129S1SvImJ_G0018863	Ddx52	73	32.648	MGP_129S1SvImJ_G0016541	Ddx59	64	33.741
MGP_129S1SvImJ_G0018863	Ddx52	60	32.044	MGP_129S1SvImJ_G0022678	Eif4a2	90	30.240
MGP_129S1SvImJ_G0018863	Ddx52	61	30.081	MGP_129S1SvImJ_G0033699	Ddx49	76	30.081