EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0018919 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 6378 bases
Position: chr11:89728139-89734516
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0031570	RRM_1	PF00076.22	6.2e-34	1	2
MGP_129S1SvImJ_P0031570	RRM_1	PF00076.22	6.2e-34	2	2
MGP_129S1SvImJ_P0031569	RRM_1	PF00076.22	2.4e-33	1	2
MGP_129S1SvImJ_P0031569	RRM_1	PF00076.22	2.4e-33	2	2
MGP_129S1SvImJ_P0031572	RRM_1	PF00076.22	2.6e-33	1	2
MGP_129S1SvImJ_P0031572	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0031574	-	401	-	MGP_129S1SvImJ_P0031574	57 (aa)	-	-
MGP_129S1SvImJ_T0031575	-	758	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0031570	-	2948	-	MGP_129S1SvImJ_P0031570	201 (aa)	-	-
MGP_129S1SvImJ_T0031571	-	647	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0031572	-	1209	-	MGP_129S1SvImJ_P0031572	253 (aa)	-	-
MGP_129S1SvImJ_T0031573	-	895	-	MGP_129S1SvImJ_P0031573	105 (aa)	-	-
MGP_129S1SvImJ_T0031569	-	5357	-	MGP_129S1SvImJ_P0031569	248 (aa)	-	Q6PDM2

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018919	Srsf1	82	42.857	MGP_129S1SvImJ_G0026813	Srsf6	58	40.670
MGP_129S1SvImJ_G0018919	Srsf1	80	46.988	MGP_129S1SvImJ_G0019895	Srsf5	96	51.020
MGP_129S1SvImJ_G0018919	Srsf1	50	36.975	MGP_129S1SvImJ_G0033806	-	55	39.474
MGP_129S1SvImJ_G0018919	Srsf1	79	79.762	MGP_129S1SvImJ_G0029965	Srsf9	78	70.330