EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018924 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 399024 bases
Position: chr11:90055958-90454981
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0031591	RRM_1	PF00076.22	6.3e-34	1	2
MGP_129S1SvImJ_P0031591	RRM_1	PF00076.22	6.3e-34	2	2
MGP_129S1SvImJ_P0031592	RRM_1	PF00076.22	6.6e-34	1	2
MGP_129S1SvImJ_P0031592	RRM_1	PF00076.22	6.6e-34	2	2
MGP_129S1SvImJ_P0031595	RRM_1	PF00076.22	3.9e-22	1	1
MGP_129S1SvImJ_P0031596	RRM_1	PF00076.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0031592	-	1857	-	MGP_129S1SvImJ_P0031592	346 (aa)	-	-
MGP_129S1SvImJ_T0031593	-	1749	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0031591	-	6299	XM_006534432	MGP_129S1SvImJ_P0031591	328 (aa)	XP_006534495	Q920Q6
MGP_129S1SvImJ_T0031596	-	617	-	MGP_129S1SvImJ_P0031596	157 (aa)	-	-
MGP_129S1SvImJ_T0031597	-	578	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0031594	-	2534	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0031595	-	405	-	MGP_129S1SvImJ_P0031595	113 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018924	Msi2	100	44.348	MGP_129S1SvImJ_G0030734	Hnrnpa2b1	56	48.193
MGP_129S1SvImJ_G0018924	Msi2	100	90.323	MGP_129S1SvImJ_G0029969	Msi1	99	75.665
MGP_129S1SvImJ_G0018924	Msi2	80	34.074	MGP_129S1SvImJ_G0026952	Rbm38	70	38.095
MGP_129S1SvImJ_G0018924	Msi2	61	41.429	MGP_129S1SvImJ_G0017486	Cirbp	88	43.243
MGP_129S1SvImJ_G0018924	Msi2	60	33.824	MGP_129S1SvImJ_G0019988	Slirp	70	33.824
MGP_129S1SvImJ_G0018924	Msi2	100	53.982	MGP_129S1SvImJ_G0029780	Hnrnpd	87	58.025
MGP_129S1SvImJ_G0018924	Msi2	100	54.867	MGP_129S1SvImJ_G0029782	Hnrnpdl	78	41.634
MGP_129S1SvImJ_G0018924	Msi2	99	42.400	MGP_129S1SvImJ_G0017492	Dazap1	92	49.462
MGP_129S1SvImJ_G0018924	Msi2	100	35.398	MGP_129S1SvImJ_G0029129	Tardbp	79	31.818
MGP_129S1SvImJ_G0018924	Msi2	84	30.208	MGP_129S1SvImJ_G0028576	Elavl4	78	30.088
MGP_129S1SvImJ_G0018924	Msi2	65	38.356	MGP_129S1SvImJ_G0033806	-	77	45.205
MGP_129S1SvImJ_G0018924	Msi2	100	52.212	MGP_129S1SvImJ_G0018269	Hnrnpab	70	48.039
MGP_129S1SvImJ_G0018924	Msi2	61	42.857	MGP_129S1SvImJ_G0035748	Rbmx	88	45.205
MGP_129S1SvImJ_G0018924	Msi2	61	42.857	MGP_129S1SvImJ_G0035541	Rbm3	82	43.243
MGP_129S1SvImJ_G0018924	Msi2	50	33.333	MGP_129S1SvImJ_G0016035	Boll	65	32.857
MGP_129S1SvImJ_G0018924	Msi2	70	31.250	MGP_129S1SvImJ_G0028445	Elavl2	72	32.632
MGP_129S1SvImJ_G0018924	Msi2	99	41.228	MGP_129S1SvImJ_G0020627	Hnrnpa0	59	41.989