EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0019046 (Gene tree)
Gene ID: -
Gene Symbol: Arl5c
Alias: Arl12|BC065791
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 6406 bases
Position: chr11:100479168-100485573
Accession: 3028577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0032082	MMR_HSR1	PF01926.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0032083	-	723	-	MGP_129S1SvImJ_P0032083	98 (aa)	-	-
MGP_129S1SvImJ_T0032082	-	1573	-	MGP_129S1SvImJ_P0032082	179 (aa)	-	Q6P068

Gene Model

Click here to download MGP_129S1SvImJ_G0019046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0019046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0019046	Arl5c	98	44.886	MGP_129S1SvImJ_G0018393	Arf1	97	44.886
MGP_129S1SvImJ_G0019046	Arl5c	87	39.506	MGP_129S1SvImJ_G0019699	Arl4a	81	39.506
MGP_129S1SvImJ_G0019046	Arl5c	86	36.250	MGP_129S1SvImJ_G0019210	Arl4d	80	36.250
MGP_129S1SvImJ_G0019046	Arl5c	87	39.103	MGP_129S1SvImJ_G0021439	Arl11	89	39.103
MGP_129S1SvImJ_G0019046	Arl5c	88	45.570	MGP_129S1SvImJ_G0017631	Arl1	91	44.186
MGP_129S1SvImJ_G0019046	Arl5c	63	30.000	MGP_129S1SvImJ_G0019371	Rab37	55	30.000
MGP_129S1SvImJ_G0019046	Arl5c	88	37.500	MGP_129S1SvImJ_G0027294	Arl14	83	37.500
MGP_129S1SvImJ_G0019046	Arl5c	98	74.286	MGP_129S1SvImJ_G0025366	Arl5b	97	74.286
MGP_129S1SvImJ_G0019046	Arl5c	88	41.772	MGP_129S1SvImJ_G0024751	Arl2	86	41.772
MGP_129S1SvImJ_G0019046	Arl5c	96	42.197	MGP_129S1SvImJ_G0030508	Arf5	96	42.197
MGP_129S1SvImJ_G0019046	Arl5c	96	41.040	MGP_129S1SvImJ_G0025211	Arl3	95	41.040
MGP_129S1SvImJ_G0019046	Arl5c	63	30.702	MGP_129S1SvImJ_G0020571	Arl10	55	30.702
MGP_129S1SvImJ_G0019046	Arl5c	63	30.000	MGP_129S1SvImJ_G0028039	Rab2a	55	30.000
MGP_129S1SvImJ_G0019046	Arl5c	99	38.043	MGP_129S1SvImJ_G0022932	Arl6	98	38.043
MGP_129S1SvImJ_G0019046	Arl5c	98	44.318	MGP_129S1SvImJ_G0019271	Arf2	97	44.318
MGP_129S1SvImJ_G0019046	Arl5c	98	43.750	MGP_129S1SvImJ_G0022309	Arf3	97	43.750
MGP_129S1SvImJ_G0019046	Arl5c	96	37.705	MGP_129S1SvImJ_G0027020	Arfrp1	93	40.708
MGP_129S1SvImJ_G0019046	Arl5c	84	41.509	MGP_129S1SvImJ_G0016288	Arl4c	82	41.509
MGP_129S1SvImJ_G0019046	Arl5c	98	72.000	MGP_129S1SvImJ_G0025734	Arl5a	98	72.000