EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0019246 (Gene tree)
Gene ID: -
Gene Symbol: Eftud2
Alias: 116kDa|Snrp116|U5-116kD
Full Name: elongation factor Tu GTP binding domain containing 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 42011 bases
Position: chr11:105869562-105911572
Accession: 1336880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0032825	GTP_EFTU	PF00009.27	6e-45	1	1
MGP_129S1SvImJ_P0032826	GTP_EFTU	PF00009.27	6e-45	1	1
MGP_129S1SvImJ_P0032828	GTP_EFTU	PF00009.27	2.2e-37	1	1
MGP_129S1SvImJ_P0032828	GTP_EFTU_D2	PF03144.25	1.7e-12	1	1
MGP_129S1SvImJ_P0032825	GTP_EFTU_D2	PF03144.25	1.7e-12	1	1
MGP_129S1SvImJ_P0032826	GTP_EFTU_D2	PF03144.25	1.7e-12	1	1
MGP_129S1SvImJ_P0032828	EFG_IV	PF03764.18	4.1e-23	1	1
MGP_129S1SvImJ_P0032825	EFG_IV	PF03764.18	4.2e-23	1	1
MGP_129S1SvImJ_P0032826	EFG_IV	PF03764.18	4.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0032829	-	567	-	MGP_129S1SvImJ_P0032829	84 (aa)	-	-
MGP_129S1SvImJ_T0032828	-	2889	-	MGP_129S1SvImJ_P0032828	962 (aa)	-	-
MGP_129S1SvImJ_T0032830	-	631	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0032831	-	934	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0032832	-	629	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0032833	-	679	-	MGP_129S1SvImJ_P0032833	30 (aa)	-	-
MGP_129S1SvImJ_T0032827	-	397	-	MGP_129S1SvImJ_P0032827	97 (aa)	-	-
MGP_129S1SvImJ_T0032826	-	3342	-	MGP_129S1SvImJ_P0032826	972 (aa)	-	-
MGP_129S1SvImJ_T0032825	-	3324	XM_006532665	MGP_129S1SvImJ_P0032825	972 (aa)	XP_006532728	O08810
MGP_129S1SvImJ_T0032835	-	3224	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0032836	-	581	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0032837	-	796	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0032834	-	1348	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0019246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0019246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0019246	Eftud2	73	33.803	MGP_129S1SvImJ_G0032445	Efl1	73	39.306