EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0019313 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 10749 bases
Position: chr11:110115267-110126015
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0033113	P68HR	PF08061.11	6.9e-09	1	1
MGP_129S1SvImJ_P0033113	DEAD	PF00270.29	2.3e-47	1	1
MGP_129S1SvImJ_P0033120	DEAD	PF00270.29	1.5e-15	1	1
MGP_129S1SvImJ_P0033121	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0033118	-	708	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0033119	-	810	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0033113	-	3139	XM_006532135	MGP_129S1SvImJ_P0033113	519 (aa)	XP_006532198	B1ARB9
MGP_129S1SvImJ_T0033114	-	3067	-	MGP_129S1SvImJ_P0033114	406 (aa)	-	-
MGP_129S1SvImJ_T0033115	-	570	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0033116	-	714	-	MGP_129S1SvImJ_P0033116	71 (aa)	-	-
MGP_129S1SvImJ_T0033117	-	496	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0033121	-	831	-	MGP_129S1SvImJ_P0033121	167 (aa)	-	-
MGP_129S1SvImJ_T0033120	-	861	-	MGP_129S1SvImJ_P0033120	182 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0019313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0019313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0019313	Ddx5	80	42.522	MGP_129S1SvImJ_G0035571	Ddx3x	61	43.276
MGP_129S1SvImJ_G0019313	Ddx5	71	37.457	MGP_129S1SvImJ_G0031412	Ddx47	80	37.389
MGP_129S1SvImJ_G0019313	Ddx5	93	83.598	MGP_129S1SvImJ_G0022077	Ddx17	72	82.415
MGP_129S1SvImJ_G0019313	Ddx5	80	38.922	MGP_129S1SvImJ_G0020938	Ddx4	57	39.012
MGP_129S1SvImJ_G0019313	Ddx5	65	30.678	MGP_129S1SvImJ_G0034714	Ddx6	68	30.678
MGP_129S1SvImJ_G0019313	Ddx5	66	30.137	MGP_129S1SvImJ_G0030100	Ddx55	57	30.137
MGP_129S1SvImJ_G0019313	Ddx5	76	34.062	MGP_129S1SvImJ_G0033699	Ddx49	97	35.211
MGP_129S1SvImJ_G0019313	Ddx5	72	33.110	MGP_129S1SvImJ_G0019478	Eif4a3	82	34.857
MGP_129S1SvImJ_G0019313	Ddx5	76	31.204	MGP_129S1SvImJ_G0018863	Ddx52	66	31.204
MGP_129S1SvImJ_G0019313	Ddx5	70	33.446	MGP_129S1SvImJ_G0017303	Ddx50	51	34.302
MGP_129S1SvImJ_G0019313	Ddx5	72	30.070	MGP_129S1SvImJ_G0025533	Ddx31	56	31.313
MGP_129S1SvImJ_G0019313	Ddx5	86	32.857	MGP_129S1SvImJ_G0016541	Ddx59	69	30.128
MGP_129S1SvImJ_G0019313	Ddx5	81	36.389	MGP_129S1SvImJ_G0022305	Ddx23	50	37.915
MGP_129S1SvImJ_G0019313	Ddx5	78	32.110	MGP_129S1SvImJ_G0022678	Eif4a2	92	33.714
MGP_129S1SvImJ_G0019313	Ddx5	73	31.148	MGP_129S1SvImJ_G0034536	Ddx25	73	32.425
MGP_129S1SvImJ_G0019313	Ddx5	74	31.699	MGP_129S1SvImJ_G0016412	Ddx18	50	33.134
MGP_129S1SvImJ_G0019313	Ddx5	89	45.040	MGP_129S1SvImJ_G0035068	Ddx43	68	44.519
MGP_129S1SvImJ_G0019313	Ddx5	78	31.498	MGP_129S1SvImJ_G0018546	Eif4a1	88	32.951
MGP_129S1SvImJ_G0019313	Ddx5	81	42.105	MGP_129S1SvImJ_G0016921	D1Pas1	61	43.032
MGP_129S1SvImJ_G0019313	Ddx5	81	38.235	MGP_129S1SvImJ_G0020602	Ddx41	64	39.163
MGP_129S1SvImJ_G0019313	Ddx5	65	30.029	MGP_129S1SvImJ_G0023633	Ddx39b	77	30.029
MGP_129S1SvImJ_G0019313	Ddx5	90	41.474	MGP_129S1SvImJ_G0019298	Ddx42	50	40.871