EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0019885 (Gene tree)
Gene ID: -
Gene Symbol: Zfp36l1
Alias: AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|Tis11b|cMG1
Full Name: zinc finger protein 36%2C C3H type-like 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 5501 bases
Position: chr12:80446678-80452178
Accession: 107946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0035220	zf-CCCH	PF00642.24	2.7e-22	1	2
MGP_129S1SvImJ_P0035220	zf-CCCH	PF00642.24	2.7e-22	2	2
MGP_129S1SvImJ_P0035221	zf-CCCH	PF00642.24	2.7e-22	1	2
MGP_129S1SvImJ_P0035221	zf-CCCH	PF00642.24	2.7e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0035220	-	3084	-	MGP_129S1SvImJ_P0035220	338 (aa)	-	P23950
MGP_129S1SvImJ_T0035221	-	2031	-	MGP_129S1SvImJ_P0035221	338 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0019885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0019885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0019885	Zfp36l1	80	65.079	MGP_129S1SvImJ_G0024077	Zfp36l2	100	42.626