EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0019895 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 8504 bases
Position: chr12:81365523-81374026
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0035237	RRM_1	PF00076.22	1.7e-30	1	2
MGP_129S1SvImJ_P0035237	RRM_1	PF00076.22	1.7e-30	2	2
MGP_129S1SvImJ_P0035242	RRM_1	PF00076.22	1.7e-30	1	2
MGP_129S1SvImJ_P0035242	RRM_1	PF00076.22	1.7e-30	2	2
MGP_129S1SvImJ_P0035247	RRM_1	PF00076.22	1.7e-30	1	2
MGP_129S1SvImJ_P0035247	RRM_1	PF00076.22	1.7e-30	2	2
MGP_129S1SvImJ_P0035239	RRM_1	PF00076.22	1.7e-30	1	2
MGP_129S1SvImJ_P0035239	RRM_1	PF00076.22	1.7e-30	2	2
MGP_129S1SvImJ_P0035241	RRM_1	PF00076.22	1.7e-30	1	2
MGP_129S1SvImJ_P0035241	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0035248	-	3514	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0035242	-	1511	-	MGP_129S1SvImJ_P0035242	269 (aa)	-	-
MGP_129S1SvImJ_T0035243	-	538	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0035240	-	2740	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0035241	-	1518	-	MGP_129S1SvImJ_P0035241	270 (aa)	-	-
MGP_129S1SvImJ_T0035246	-	490	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0035247	-	1588	-	MGP_129S1SvImJ_P0035247	269 (aa)	-	-
MGP_129S1SvImJ_T0035244	-	886	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0035245	-	558	-	MGP_129S1SvImJ_P0035245	46 (aa)	-	-
MGP_129S1SvImJ_T0035239	-	1530	-	MGP_129S1SvImJ_P0035239	270 (aa)	-	-
MGP_129S1SvImJ_T0035238	-	2960	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0035237	-	1547	XM_006515629	MGP_129S1SvImJ_P0035237	269 (aa)	XP_006515692	O35326

Gene Model

Click here to download MGP_129S1SvImJ_G0019895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0019895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0019895	Srsf5	96	51.020	MGP_129S1SvImJ_G0018919	Srsf1	80	46.988
MGP_129S1SvImJ_G0019895	Srsf5	89	63.415	MGP_129S1SvImJ_G0026813	Srsf6	50	71.642
MGP_129S1SvImJ_G0019895	Srsf5	89	48.780	MGP_129S1SvImJ_G0029965	Srsf9	68	39.394