EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0020671 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 99889 bases
Position: chr13:63801433-63901321
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0037408	ResIII	PF04851.15	1.5e-11	1	1
MGP_129S1SvImJ_P0037410	ResIII	PF04851.15	1.9e-11	1	1
MGP_129S1SvImJ_P0037407	ResIII	PF04851.15	2e-11	1	1
MGP_129S1SvImJ_P0037405	ResIII	PF04851.15	1.1e-10	1	1
MGP_129S1SvImJ_P0037411	ResIII	PF04851.15	1.3e-10	1	1
MGP_129S1SvImJ_P0037404	ResIII	PF04851.15	8.4e-10	1	1
MGP_129S1SvImJ_P0037408	DEAD	PF00270.29	3.5e-07	1	1
MGP_129S1SvImJ_P0037411	DEAD	PF00270.29	4.1e-07	1	1
MGP_129S1SvImJ_P0037410	DEAD	PF00270.29	5.2e-07	1	1
MGP_129S1SvImJ_P0037407	DEAD	PF00270.29	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0037408	-	1888	-	MGP_129S1SvImJ_P0037408	582 (aa)	-	-
MGP_129S1SvImJ_T0037409	-	1961	-	MGP_129S1SvImJ_P0037409	191 (aa)	-	-
MGP_129S1SvImJ_T0037410	-	2530	-	MGP_129S1SvImJ_P0037410	684 (aa)	-	-
MGP_129S1SvImJ_T0037411	-	1726	-	MGP_129S1SvImJ_P0037411	574 (aa)	-	-
MGP_129S1SvImJ_T0037406	-	1820	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0037407	-	2693	-	MGP_129S1SvImJ_P0037407	699 (aa)	-	-
MGP_129S1SvImJ_T0037404	-	1592	-	MGP_129S1SvImJ_P0037404	467 (aa)	-	Q9JIM3
MGP_129S1SvImJ_T0037405	-	3436	-	MGP_129S1SvImJ_P0037405	842 (aa)	-	-
MGP_129S1SvImJ_T0037413	-	975	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0037414	-	2579	-	MGP_129S1SvImJ_P0037414	592 (aa)	-	-
MGP_129S1SvImJ_T0037412	-	759	-	MGP_129S1SvImJ_P0037412	152 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0020671	Ercc6l2	82	30.353	MGP_129S1SvImJ_G0035684	Smarca1	71	30.490
MGP_129S1SvImJ_G0020671	Ercc6l2	81	30.021	MGP_129S1SvImJ_G0027641	Chd1l	50	32.657