EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0020717 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 106339 bases
Position: chr13:67781982-67888320
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0037504	zf-C2H2	PF00096.26	6.2e-43	1	8
MGP_129S1SvImJ_P0037504	zf-C2H2	PF00096.26	6.2e-43	2	8
MGP_129S1SvImJ_P0037504	zf-C2H2	PF00096.26	6.2e-43	3	8
MGP_129S1SvImJ_P0037504	zf-C2H2	PF00096.26	6.2e-43	4	8
MGP_129S1SvImJ_P0037504	zf-C2H2	PF00096.26	6.2e-43	5	8
MGP_129S1SvImJ_P0037504	zf-C2H2	PF00096.26	6.2e-43	6	8
MGP_129S1SvImJ_P0037504	zf-C2H2	PF00096.26	6.2e-43	7	8
MGP_129S1SvImJ_P0037504	zf-C2H2	PF00096.26	6.2e-43	8	8
MGP_129S1SvImJ_P0037504	zf-met	PF12874.7	1.1e-08	1	2
MGP_129S1SvImJ_P0037504	zf-met	PF12874.7	1.1e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0037504	-	4287	-	MGP_129S1SvImJ_P0037504	300 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0020717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0020717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0020717	-	95	49.035	MGP_129S1SvImJ_G0023229	Zfp51	89	49.035
MGP_129S1SvImJ_G0020717	-	94	46.452	MGP_129S1SvImJ_G0033035	E430018J23Rik	60	46.452
MGP_129S1SvImJ_G0020717	-	86	48.413	MGP_129S1SvImJ_G0033032	Zfp768	52	48.413
MGP_129S1SvImJ_G0020717	-	89	49.239	MGP_129S1SvImJ_G0034143	Zfp1	68	49.239
MGP_129S1SvImJ_G0020717	-	95	40.392	MGP_129S1SvImJ_G0030834	Prdm5	74	40.392
MGP_129S1SvImJ_G0020717	-	96	56.652	MGP_129S1SvImJ_G0020698	Rslcan18	70	56.652
MGP_129S1SvImJ_G0020717	-	92	50.820	MGP_129S1SvImJ_G0026463	Zfp661	57	50.820
MGP_129S1SvImJ_G0020717	-	93	52.713	MGP_129S1SvImJ_G0034481	Zfp872	90	52.713
MGP_129S1SvImJ_G0020717	-	93	46.364	MGP_129S1SvImJ_G0031853	Zfp574	74	43.697
MGP_129S1SvImJ_G0020717	-	91	53.333	MGP_129S1SvImJ_G0031576	Zfp865	80	40.678
MGP_129S1SvImJ_G0020717	-	89	45.556	MGP_129S1SvImJ_G0029048	Zbtb17	56	45.556
MGP_129S1SvImJ_G0020717	-	83	34.272	MGP_129S1SvImJ_G0031579	Zfp784	71	34.821
MGP_129S1SvImJ_G0020717	-	94	39.623	MGP_129S1SvImJ_G0023258	Zscan10	75	39.623
MGP_129S1SvImJ_G0020717	-	92	47.706	MGP_129S1SvImJ_G0029844	Gfi1	100	47.706
MGP_129S1SvImJ_G0020717	-	90	55.426	MGP_129S1SvImJ_G0018255	Zfp454	66	55.426
MGP_129S1SvImJ_G0020717	-	91	44.845	MGP_129S1SvImJ_G0029507	Zbtb49	90	50.000
MGP_129S1SvImJ_G0020717	-	95	51.208	MGP_129S1SvImJ_G0026892	Zfp334	66	51.208
MGP_129S1SvImJ_G0020717	-	95	53.876	MGP_129S1SvImJ_G0023227	Zfp677	83	53.876
MGP_129S1SvImJ_G0020717	-	92	56.383	MGP_129S1SvImJ_G0031820	Zfp108	75	52.713
MGP_129S1SvImJ_G0020717	-	95	40.467	MGP_129S1SvImJ_G0033983	Zfp319	92	40.310
MGP_129S1SvImJ_G0020717	-	93	34.812	MGP_129S1SvImJ_G0030700	Repin1	92	34.812
MGP_129S1SvImJ_G0020717	-	94	55.039	MGP_129S1SvImJ_G0022013	Zfp251	69	55.039
MGP_129S1SvImJ_G0020717	-	96	37.358	MGP_129S1SvImJ_G0026930	Zfp64	72	37.358
MGP_129S1SvImJ_G0020717	-	90	69.565	MGP_129S1SvImJ_G0020699	Zfp759	87	65.891
MGP_129S1SvImJ_G0020717	-	99	46.899	MGP_129S1SvImJ_G0023250	Zfp945	80	46.899
MGP_129S1SvImJ_G0020717	-	95	69.725	MGP_129S1SvImJ_G0020719	Zfp65	90	69.403
MGP_129S1SvImJ_G0020717	-	90	58.140	MGP_129S1SvImJ_G0020716	Zfp748	92	59.144
MGP_129S1SvImJ_G0020717	-	92	55.426	MGP_129S1SvImJ_G0032116	Zfp141	58	55.426
MGP_129S1SvImJ_G0020717	-	99	51.550	MGP_129S1SvImJ_G0032117	Zfp715	67	51.550
MGP_129S1SvImJ_G0020717	-	99	42.500	MGP_129S1SvImJ_G0024602	Zfp236	72	42.500
MGP_129S1SvImJ_G0020717	-	91	42.788	MGP_129S1SvImJ_G0031568	Zfp628	60	49.333
MGP_129S1SvImJ_G0020717	-	86	55.357	MGP_129S1SvImJ_G0031577	-	66	35.521
MGP_129S1SvImJ_G0020717	-	94	43.534	MGP_129S1SvImJ_G0018349	Zfp672	90	43.534
MGP_129S1SvImJ_G0020717	-	95	51.550	MGP_129S1SvImJ_G0031823	Zfp94	74	51.550
MGP_129S1SvImJ_G0020717	-	92	53.488	MGP_129S1SvImJ_G0031816	Zfp235	80	53.488
MGP_129S1SvImJ_G0020717	-	92	52.326	MGP_129S1SvImJ_G0031815	Zfp112	60	52.326
MGP_129S1SvImJ_G0020717	-	93	51.515	MGP_129S1SvImJ_G0018399	Zfp867	90	51.515
MGP_129S1SvImJ_G0020717	-	92	53.101	MGP_129S1SvImJ_G0033764	Zfp709	87	53.101
MGP_129S1SvImJ_G0020717	-	94	53.125	MGP_129S1SvImJ_G0033765	Zfp882	85	53.125
MGP_129S1SvImJ_G0020717	-	96	60.000	MGP_129S1SvImJ_G0031990	Zfp420	98	60.000
MGP_129S1SvImJ_G0020717	-	98	50.862	MGP_129S1SvImJ_G0031178	Zfp637	85	50.515