EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0020938 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: AV206478|Mvh|VASA|Vasa|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 54477 bases
Position: chr13:115161415-115215891
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0038188	DEAD	PF00270.29	4.5e-49	1	1
MGP_129S1SvImJ_P0038189	DEAD	PF00270.29	5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0038188	-	2770	XM_006517524	MGP_129S1SvImJ_P0038188	702 (aa)	XP_006517587	Q61496
MGP_129S1SvImJ_T0038189	-	2848	-	MGP_129S1SvImJ_P0038189	728 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0020938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0020938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0020938	Ddx4	62	52.596	MGP_129S1SvImJ_G0016921	D1Pas1	71	49.578
MGP_129S1SvImJ_G0020938	Ddx4	52	33.687	MGP_129S1SvImJ_G0033699	Ddx49	95	33.616
MGP_129S1SvImJ_G0020938	Ddx4	57	34.069	MGP_129S1SvImJ_G0018863	Ddx52	66	34.069
MGP_129S1SvImJ_G0020938	Ddx4	56	40.000	MGP_129S1SvImJ_G0035068	Ddx43	60	40.000
MGP_129S1SvImJ_G0020938	Ddx4	51	32.782	MGP_129S1SvImJ_G0034714	Ddx6	71	32.782
MGP_129S1SvImJ_G0020938	Ddx4	53	38.684	MGP_129S1SvImJ_G0016541	Ddx59	59	38.684
MGP_129S1SvImJ_G0020938	Ddx4	67	50.513	MGP_129S1SvImJ_G0035571	Ddx3x	69	51.528
MGP_129S1SvImJ_G0020938	Ddx4	57	39.012	MGP_129S1SvImJ_G0019313	Ddx5	80	38.922
MGP_129S1SvImJ_G0020938	Ddx4	56	34.271	MGP_129S1SvImJ_G0031412	Ddx47	93	33.760
MGP_129S1SvImJ_G0020938	Ddx4	54	30.326	MGP_129S1SvImJ_G0034536	Ddx25	80	30.488
MGP_129S1SvImJ_G0020938	Ddx4	57	39.163	MGP_129S1SvImJ_G0022077	Ddx17	61	39.163
MGP_129S1SvImJ_G0020938	Ddx4	56	30.691	MGP_129S1SvImJ_G0019478	Eif4a3	90	30.691
MGP_129S1SvImJ_G0020938	Ddx4	57	38.519	MGP_129S1SvImJ_G0020602	Ddx41	64	38.519