EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0021734 (Gene tree)
Gene ID: -
Gene Symbol: Zfr
Alias: C920030H05Rik
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 69670 bases
Position: chr15:9339489-9409158
Accession: 1341890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0040631	DZF	PF07528.14	1.2e-69	1	1
MGP_129S1SvImJ_P0040636	DZF	PF07528.14	6.5e-66	1	1
MGP_129S1SvImJ_P0040631	zf-met	PF12874.7	3.5e-21	1	3
MGP_129S1SvImJ_P0040631	zf-met	PF12874.7	3.5e-21	2	3
MGP_129S1SvImJ_P0040631	zf-met	PF12874.7	3.5e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0040639	-	865	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0040638	-	666	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0040633	-	633	-	MGP_129S1SvImJ_P0040633	193 (aa)	-	-
MGP_129S1SvImJ_T0040632	-	812	-	MGP_129S1SvImJ_P0040632	247 (aa)	-	-
MGP_129S1SvImJ_T0040631	-	4853	XM_006520057	MGP_129S1SvImJ_P0040631	1074 (aa)	XP_006520120	O88532
MGP_129S1SvImJ_T0040637	-	941	-	MGP_129S1SvImJ_P0040637	43 (aa)	-	-
MGP_129S1SvImJ_T0040636	-	897	-	MGP_129S1SvImJ_P0040636	298 (aa)	-	-
MGP_129S1SvImJ_T0040635	-	565	-	MGP_129S1SvImJ_P0040635	114 (aa)	-	-
MGP_129S1SvImJ_T0040634	-	513	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0021734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0021734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0021734	Zfr	100	53.443	MGP_129S1SvImJ_G0025697	Strbp	97	46.825
MGP_129S1SvImJ_G0021734	Zfr	100	55.518	MGP_129S1SvImJ_G0017544	Zfr2	91	51.534