EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_129S1SvImJ_G0022089 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_129s1svimj
Status
putative
Strand
Plus strand
Length
24301 bases
Position
chr15:80190522-80214822
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_129S1SvImJ_P0041764APOBEC_NPF08210.112.6e-7912
MGP_129S1SvImJ_P0041764APOBEC_NPF08210.112.6e-7922
MGP_129S1SvImJ_P0041761APOBEC_NPF08210.113.3e-7912
MGP_129S1SvImJ_P0041761APOBEC_NPF08210.113.3e-7922
MGP_129S1SvImJ_P0041765APOBEC_NPF08210.113.3e-7912
MGP_129S1SvImJ_P0041765APOBEC_NPF08210.113.3e-7922
MGP_129S1SvImJ_P0041767APOBEC_NPF08210.113.7e-7912
MGP_129S1SvImJ_P0041767APOBEC_NPF08210.113.7e-7922
MGP_129S1SvImJ_P0041759APOBEC_NPF08210.112.6e-2611
MGP_129S1SvImJ_P0041758APOBEC_NPF08210.117.7e-2611
MGP_129S1SvImJ_P0041768APOBEC_NPF08210.118.7e-2411
MGP_129S1SvImJ_P0041764APOBEC_CPF05240.147.7e-5412
MGP_129S1SvImJ_P0041764APOBEC_CPF05240.147.7e-5422
MGP_129S1SvImJ_P0041761APOBEC_CPF05240.141.2e-5312
MGP_129S1SvImJ_P0041761APOBEC_CPF05240.141.2e-5322
MGP_129S1SvImJ_P0041765APOBEC_CPF05240.141.3e-5312
MGP_129S1SvImJ_P0041765APOBEC_CPF05240.141.3e-5322
MGP_129S1SvImJ_P0041767APOBEC_CPF05240.141.5e-5312
MGP_129S1SvImJ_P0041767APOBEC_CPF05240.141.5e-5322
MGP_129S1SvImJ_P0041758APOBEC_CPF05240.144.4e-2811
MGP_129S1SvImJ_P0041759APOBEC_CPF05240.145.2e-2811
MGP_129S1SvImJ_P0041768APOBEC_CPF05240.141.7e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_129S1SvImJ_T0041759-817-MGP_129S1SvImJ_P0041759151 (aa)--
MGP_129S1SvImJ_T0041758-750XM_006521551MGP_129S1SvImJ_P0041758166 (aa)XP_006521614Q99J72
MGP_129S1SvImJ_T0041771-720--- (aa)--
MGP_129S1SvImJ_T0041770-2082--- (aa)--
MGP_129S1SvImJ_T0041766-2246-MGP_129S1SvImJ_P0041766392 (aa)--
MGP_129S1SvImJ_T0041767-1323-MGP_129S1SvImJ_P0041767440 (aa)--
MGP_129S1SvImJ_T0041764-1980-MGP_129S1SvImJ_P0041764407 (aa)--
MGP_129S1SvImJ_T0041765-2780-MGP_129S1SvImJ_P0041765430 (aa)--
MGP_129S1SvImJ_T0041762-699-MGP_129S1SvImJ_P004176279 (aa)--
MGP_129S1SvImJ_T0041763-1217-MGP_129S1SvImJ_P004176346 (aa)--
MGP_129S1SvImJ_T0041760-607--- (aa)--
MGP_129S1SvImJ_T0041761-2460-MGP_129S1SvImJ_P0041761429 (aa)--
MGP_129S1SvImJ_T0041768-648-MGP_129S1SvImJ_P004176885 (aa)--
MGP_129S1SvImJ_T0041769-731--- (aa)--
Gene Model
Click here to download MGP_129S1SvImJ_G0022089's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0022089's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_129S1SvImJ_G0022089Apobec39833.721MGP_129S1SvImJ_G0023873Apobec27833.333
MGP_129S1SvImJ_G0022089Apobec38438.028MGP_129S1SvImJ_G0031229Apobec17434.737
MGP_129S1SvImJ_G0022089Apobec39642.169MGP_129S1SvImJ_G0031228Aicda9137.705

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