EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0022415 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp2
Alias: AW412548|Cbp|Hnrnpx|Hnrpx|alphaCP-2
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 32204 bases
Position: chr15:104657586-104689789
Accession: 108202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0042784	KH_1	PF00013.29	1.6e-49	1	3
MGP_129S1SvImJ_P0042784	KH_1	PF00013.29	1.6e-49	2	3
MGP_129S1SvImJ_P0042784	KH_1	PF00013.29	1.6e-49	3	3
MGP_129S1SvImJ_P0042786	KH_1	PF00013.29	2e-49	1	3
MGP_129S1SvImJ_P0042786	KH_1	PF00013.29	2e-49	2	3
MGP_129S1SvImJ_P0042786	KH_1	PF00013.29	2e-49	3	3
MGP_129S1SvImJ_P0042785	KH_1	PF00013.29	2.4e-49	1	3
MGP_129S1SvImJ_P0042785	KH_1	PF00013.29	2.4e-49	2	3
MGP_129S1SvImJ_P0042785	KH_1	PF00013.29	2.4e-49	3	3
MGP_129S1SvImJ_P0042784	KH_2	PF07650.17	2e-14	1	1
MGP_129S1SvImJ_P0042786	KH_2	PF07650.17	2.5e-14	1	1
MGP_129S1SvImJ_P0042785	KH_2	PF07650.17	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0042785	-	2784	-	MGP_129S1SvImJ_P0042785	362 (aa)	-	-
MGP_129S1SvImJ_T0042784	-	2691	XM_006520582	MGP_129S1SvImJ_P0042784	331 (aa)	XP_006520645	Q61990
MGP_129S1SvImJ_T0042786	-	2745	-	MGP_129S1SvImJ_P0042786	349 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0022415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0022415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0022415	Pcbp2	95	35.556	MGP_129S1SvImJ_G0022666	Igf2bp2	62	35.556
MGP_129S1SvImJ_G0022415	Pcbp2	54	30.899	MGP_129S1SvImJ_G0032452	-	79	30.387
MGP_129S1SvImJ_G0022415	Pcbp2	69	39.726	MGP_129S1SvImJ_G0019714	Nova1	53	39.726
MGP_129S1SvImJ_G0022415	Pcbp2	99	78.338	MGP_129S1SvImJ_G0017390	Pcbp3	99	82.143
MGP_129S1SvImJ_G0022415	Pcbp2	100	81.744	MGP_129S1SvImJ_G0030978	Pcbp1	100	81.744
MGP_129S1SvImJ_G0022415	Pcbp2	68	33.333	MGP_129S1SvImJ_G0023949	Khsrp	51	33.333
MGP_129S1SvImJ_G0022415	Pcbp2	97	59.877	MGP_129S1SvImJ_G0035232	Pcbp4	98	66.321
MGP_129S1SvImJ_G0022415	Pcbp2	84	44.444	MGP_129S1SvImJ_G0020633	Hnrnpk	78	31.724
MGP_129S1SvImJ_G0022415	Pcbp2	68	41.096	MGP_129S1SvImJ_G0031749	-	50	41.096