EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0022435 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa1
Alias: D15Ertd119e|EG545091|Fli-2|HDP-1|Hdp|Hnrpa1|Hnrpa1 {ECO:0000313|EMBL:AAH89340.1,GN ECO:0000313|MGI:MGI:104820}|Tis|hnRNP A1|hnrnp-A|hnrnp-A1
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 4604 bases
Position: chr15:105492609-105497212
Accession: 104820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0042852	RRM_1	PF00076.22	1.2e-26	1	1
MGP_129S1SvImJ_P0042852	HnRNPA1	PF11627.8	3.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0042852	-	1077	-	MGP_129S1SvImJ_P0042852	358 (aa)	-	P49312

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0022435	Hnrnpa1	88	55.319	MGP_129S1SvImJ_G0030734	Hnrnpa2b1	82	74.286
MGP_129S1SvImJ_G0022435	Hnrnpa1	63	39.080	MGP_129S1SvImJ_G0029969	Msi1	59	39.080
MGP_129S1SvImJ_G0022435	Hnrnpa1	63	33.333	MGP_129S1SvImJ_G0018269	Hnrnpab	61	36.723
MGP_129S1SvImJ_G0022435	Hnrnpa1	50	35.784	MGP_129S1SvImJ_G0017492	Dazap1	100	38.596
MGP_129S1SvImJ_G0022435	Hnrnpa1	53	30.151	MGP_129S1SvImJ_G0029129	Tardbp	66	34.074