EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0022490 (Gene tree)
Gene ID: -
Gene Symbol: Rbfox1
Alias: A2bp|A2bp1|FOX1|Fox1|HRNBP1|Hrnbp1|fox-1
Full Name: RNA binding protein%2C fox-1 homolog (C. elegans) 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 639534 bases
Position: chr16:3429752-4069285
Accession: 1926224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0043059	Fox-1_C	PF12414.8	2e-42	1	1
MGP_129S1SvImJ_P0043060	Fox-1_C	PF12414.8	2.3e-40	1	1
MGP_129S1SvImJ_P0043060	RRM_1	PF00076.22	5.5e-18	1	1
MGP_129S1SvImJ_P0043059	RRM_1	PF00076.22	5.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0043060	-	4110	-	MGP_129S1SvImJ_P0043060	417 (aa)	-	-
MGP_129S1SvImJ_T0043059	-	1191	XM_006522184	MGP_129S1SvImJ_P0043059	396 (aa)	XP_006522247	Q9JJ43
MGP_129S1SvImJ_T0043061	-	5228	-	MGP_129S1SvImJ_P0043061	424 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0022490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0022490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0022490	Rbfox1	91	65.123	MGP_129S1SvImJ_G0019470	Rbfox3	100	71.930
MGP_129S1SvImJ_G0022490	Rbfox1	100	62.287	MGP_129S1SvImJ_G0022021	Rbfox2	100	62.044