EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0022523 (Gene tree)
Gene ID: -
Gene Symbol: Gspt1
Alias: AI314175|AI326449|AV307676|C79774|Erf3a|G1st|Gst-1
Full Name: G1 to S phase transition 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 36022 bases
Position: chr16:8084613-8120634
Accession: 1316728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0043184	PAM2	PF07145.15	4e-06	1	1
MGP_129S1SvImJ_P0043185	PAM2	PF07145.15	4e-06	1	1
MGP_129S1SvImJ_P0043184	GTP_EFTU	PF00009.27	3.4e-46	1	1
MGP_129S1SvImJ_P0043185	GTP_EFTU	PF00009.27	3.4e-46	1	1
MGP_129S1SvImJ_P0043184	GTP_EFTU_D2	PF03144.25	1.1e-07	1	1
MGP_129S1SvImJ_P0043185	GTP_EFTU_D2	PF03144.25	1.1e-07	1	1
MGP_129S1SvImJ_P0043184	GTP_EFTU_D3	PF03143.17	1.7e-31	1	1
MGP_129S1SvImJ_P0043185	GTP_EFTU_D3	PF03143.17	2.2e-31	1	1
MGP_129S1SvImJ_P0043186	GTP_EFTU_D3	PF03143.17	5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0043188	-	629	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0043184	-	3716	-	MGP_129S1SvImJ_P0043184	635 (aa)	-	Q8R050
MGP_129S1SvImJ_T0043185	-	2898	-	MGP_129S1SvImJ_P0043185	636 (aa)	-	-
MGP_129S1SvImJ_T0043186	-	727	-	MGP_129S1SvImJ_P0043186	99 (aa)	-	-
MGP_129S1SvImJ_T0043187	-	836	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0022523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0022523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0022523	Gspt1	97	83.651	MGP_129S1SvImJ_G0035913	Gspt2	99	82.803
MGP_129S1SvImJ_G0022523	Gspt1	67	37.330	MGP_129S1SvImJ_G0027011	Eef1a2	95	37.330
MGP_129S1SvImJ_G0022523	Gspt1	67	42.056	MGP_129S1SvImJ_G0017059	Hbs1l	62	42.056