EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0022548 (Gene tree)
Gene ID: -
Gene Symbol: Snai2
Alias: Slug|Slugh|Snail2
Full Name: snail family zinc finger 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 3544 bases
Position: chr16:11800651-11804194
Accession: 1096393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0043290	zf-C2H2	PF00096.26	1.6e-27	1	5
MGP_129S1SvImJ_P0043290	zf-C2H2	PF00096.26	1.6e-27	2	5
MGP_129S1SvImJ_P0043290	zf-C2H2	PF00096.26	1.6e-27	3	5
MGP_129S1SvImJ_P0043290	zf-C2H2	PF00096.26	1.6e-27	4	5
MGP_129S1SvImJ_P0043290	zf-C2H2	PF00096.26	1.6e-27	5	5
MGP_129S1SvImJ_P0043290	zf-met	PF12874.7	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0043290	-	2031	-	MGP_129S1SvImJ_P0043290	269 (aa)	-	P97469

Gene Model

Click here to download MGP_129S1SvImJ_G0022548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0022548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0022548	Snai2	99	52.708	MGP_129S1SvImJ_G0026915	Snai1	98	53.650
MGP_129S1SvImJ_G0022548	Snai2	99	46.599	MGP_129S1SvImJ_G0034226	Snai3	99	46.552
MGP_129S1SvImJ_G0022548	Snai2	55	38.750	MGP_129S1SvImJ_G0018349	Zfp672	90	38.750