EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0023493 (Gene tree)
Gene ID: -
Gene Symbol: U2af1
Alias: 2010107D16Rik|35kDa
Full Name: U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 16057 bases
Position: chr17:31436179-31452235
Accession: 98884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0046770	zf-CCCH	PF00642.24	1.5e-13	1	2
MGP_129S1SvImJ_P0046770	zf-CCCH	PF00642.24	1.5e-13	2	2
MGP_129S1SvImJ_P0046771	zf-CCCH	PF00642.24	1.5e-13	1	2
MGP_129S1SvImJ_P0046771	zf-CCCH	PF00642.24	1.5e-13	2	2
MGP_129S1SvImJ_P0046771	RRM_1	PF00076.22	3e-06	1	1
MGP_129S1SvImJ_P0046770	RRM_1	PF00076.22	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0046770	-	909	-	MGP_129S1SvImJ_P0046770	240 (aa)	-	-
MGP_129S1SvImJ_T0046771	-	909	-	MGP_129S1SvImJ_P0046771	240 (aa)	-	-
MGP_129S1SvImJ_T0046769	-	896	XM_006523472	MGP_129S1SvImJ_P0046769	239 (aa)	XP_006523535	Q9D883

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0023493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0023493	U2af1	83	86.935	MGP_129S1SvImJ_G0032029	U2af1l4	100	90.385