EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0023535 (Gene tree)
Gene ID: -
Gene Symbol: Rab11b
Alias: A730055L17Rik|RAB11B|Rab11BGN
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 18955 bases
Position: chr17:33672312-33691266
Accession: 99425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0046923	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0046925	-	981	-	MGP_129S1SvImJ_P0046925	122 (aa)	-	-
MGP_129S1SvImJ_T0046924	-	1380	-	MGP_129S1SvImJ_P0046924	193 (aa)	-	-
MGP_129S1SvImJ_T0046927	-	503	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0046926	-	797	-	MGP_129S1SvImJ_P0046926	149 (aa)	-	-
MGP_129S1SvImJ_T0046923	-	5877	XM_011246326	MGP_129S1SvImJ_P0046923	218 (aa)	XP_006523950	P46638

Gene Model

Click here to download MGP_129S1SvImJ_G0023535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0023535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0023535	Rab11b	65	30.986	MGP_129S1SvImJ_G0016517	Arl8a	72	30.986
MGP_129S1SvImJ_G0023535	Rab11b	81	31.405	MGP_129S1SvImJ_G0035169	Mras	81	34.706
MGP_129S1SvImJ_G0023535	Rab11b	77	40.000	MGP_129S1SvImJ_G0022241	Rabl2	69	36.943
MGP_129S1SvImJ_G0023535	Rab11b	81	33.884	MGP_129S1SvImJ_G0031479	Kras	93	34.066
MGP_129S1SvImJ_G0023535	Rab11b	93	44.604	MGP_129S1SvImJ_G0032514	Rab30	97	39.524
MGP_129S1SvImJ_G0023535	Rab11b	80	31.746	MGP_129S1SvImJ_G0019699	Arl4a	60	31.746
MGP_129S1SvImJ_G0023535	Rab11b	81	39.669	MGP_129S1SvImJ_G0031586	Rasl2-9	70	37.013
MGP_129S1SvImJ_G0023535	Rab11b	89	38.686	MGP_129S1SvImJ_G0031005	Rab7	93	42.857
MGP_129S1SvImJ_G0023535	Rab11b	81	34.711	MGP_129S1SvImJ_G0033214	Hras	85	36.420
MGP_129S1SvImJ_G0023535	Rab11b	91	37.778	MGP_129S1SvImJ_G0032574	Rab6a	75	38.217
MGP_129S1SvImJ_G0023535	Rab11b	93	43.885	MGP_129S1SvImJ_G0023988	Rab12	70	37.736
MGP_129S1SvImJ_G0023535	Rab11b	90	41.912	MGP_129S1SvImJ_G0035694	Rab33a	75	40.331
MGP_129S1SvImJ_G0023535	Rab11b	97	71.034	MGP_129S1SvImJ_G0027400	Rab25	100	61.435
MGP_129S1SvImJ_G0023535	Rab11b	93	31.333	MGP_129S1SvImJ_G0030380	Rasl11a	62	31.333
MGP_129S1SvImJ_G0023535	Rab11b	97	53.793	MGP_129S1SvImJ_G0025650	Rab14	97	53.741
MGP_129S1SvImJ_G0023535	Rab11b	91	44.118	MGP_129S1SvImJ_G0019371	Rab37	77	44.578
MGP_129S1SvImJ_G0023535	Rab11b	93	46.763	MGP_129S1SvImJ_G0019866	Rab15	82	44.000
MGP_129S1SvImJ_G0023535	Rab11b	77	32.203	MGP_129S1SvImJ_G0019210	Arl4d	57	32.203
MGP_129S1SvImJ_G0023535	Rab11b	94	34.123	MGP_129S1SvImJ_G0017350	Rab36	79	34.123
MGP_129S1SvImJ_G0023535	Rab11b	81	34.426	MGP_129S1SvImJ_G0027689	Nras	95	37.241
MGP_129S1SvImJ_G0023535	Rab11b	89	49.624	MGP_129S1SvImJ_G0019167	Rab5c	75	48.447
MGP_129S1SvImJ_G0023535	Rab11b	91	42.222	MGP_129S1SvImJ_G0023979	Rab31	86	40.476
MGP_129S1SvImJ_G0023535	Rab11b	97	100.000	MGP_129S1SvImJ_G0034943	Rab11a	100	96.078
MGP_129S1SvImJ_G0023535	Rab11b	95	47.887	MGP_129S1SvImJ_G0024132	Rab18	78	47.531
MGP_129S1SvImJ_G0023535	Rab11b	93	56.522	MGP_129S1SvImJ_G0021294	Rab2b	99	48.387
MGP_129S1SvImJ_G0023535	Rab11b	98	53.425	MGP_129S1SvImJ_G0018064	Rab1a	100	45.581
MGP_129S1SvImJ_G0023535	Rab11b	90	49.265	MGP_129S1SvImJ_G0035862	Rab39b	82	47.126
MGP_129S1SvImJ_G0023535	Rab11b	93	57.246	MGP_129S1SvImJ_G0028039	Rab2a	81	55.556
MGP_129S1SvImJ_G0023535	Rab11b	91	42.963	MGP_129S1SvImJ_G0026959	Rab22a	81	42.675
MGP_129S1SvImJ_G0023535	Rab11b	95	55.634	MGP_129S1SvImJ_G0024693	Rab1b	99	48.095
MGP_129S1SvImJ_G0023535	Rab11b	89	42.336	MGP_129S1SvImJ_G0036106	Rab9b	86	41.040
MGP_129S1SvImJ_G0023535	Rab11b	89	48.120	MGP_129S1SvImJ_G0023887	Rab5a	90	41.667
MGP_129S1SvImJ_G0023535	Rab11b	89	34.586	MGP_129S1SvImJ_G0029356	Rheb	89	34.146
MGP_129S1SvImJ_G0023535	Rab11b	90	43.382	MGP_129S1SvImJ_G0027198	Rab33b	76	39.773
MGP_129S1SvImJ_G0023535	Rab11b	97	35.417	MGP_129S1SvImJ_G0015902	Rab23	80	33.508
MGP_129S1SvImJ_G0023535	Rab11b	78	41.026	MGP_129S1SvImJ_G0018768	Rab34	70	33.880
MGP_129S1SvImJ_G0023535	Rab11b	91	36.296	MGP_129S1SvImJ_G0035193	Rab6b	77	35.404