EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0023887 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 28176 bases
Position: chr17:55033178-55061353
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0048194	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0048194	-	2782	-	MGP_129S1SvImJ_P0048194	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_129S1SvImJ_G0023887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0023887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0023887	Rab5a	90	43.814	MGP_129S1SvImJ_G0018064	Rab1a	95	43.814
MGP_129S1SvImJ_G0023887	Rab5a	74	35.928	MGP_129S1SvImJ_G0022241	Rabl2	72	35.928
MGP_129S1SvImJ_G0023887	Rab5a	90	41.667	MGP_129S1SvImJ_G0023535	Rab11b	89	48.120
MGP_129S1SvImJ_G0023887	Rab5a	91	30.244	MGP_129S1SvImJ_G0017350	Rab36	77	30.244
MGP_129S1SvImJ_G0023887	Rab5a	90	40.704	MGP_129S1SvImJ_G0027400	Rab25	93	40.704
MGP_129S1SvImJ_G0023887	Rab5a	90	35.323	MGP_129S1SvImJ_G0036106	Rab9b	97	35.323
MGP_129S1SvImJ_G0023887	Rab5a	95	41.546	MGP_129S1SvImJ_G0032574	Rab6a	98	41.546
MGP_129S1SvImJ_G0023887	Rab5a	75	41.615	MGP_129S1SvImJ_G0028039	Rab2a	97	36.667
MGP_129S1SvImJ_G0023887	Rab5a	77	40.351	MGP_129S1SvImJ_G0027198	Rab33b	75	40.351
MGP_129S1SvImJ_G0023887	Rab5a	56	33.065	MGP_129S1SvImJ_G0031102	Arl8b	63	33.065
MGP_129S1SvImJ_G0023887	Rab5a	91	47.449	MGP_129S1SvImJ_G0023979	Rab31	98	47.449
MGP_129S1SvImJ_G0023887	Rab5a	73	32.500	MGP_129S1SvImJ_G0018768	Rab34	62	32.500
MGP_129S1SvImJ_G0023887	Rab5a	60	32.576	MGP_129S1SvImJ_G0016517	Arl8a	66	32.576
MGP_129S1SvImJ_G0023887	Rab5a	90	46.429	MGP_129S1SvImJ_G0024693	Rab1b	96	46.429
MGP_129S1SvImJ_G0023887	Rab5a	81	40.782	MGP_129S1SvImJ_G0031005	Rab7	97	45.263
MGP_129S1SvImJ_G0023887	Rab5a	89	38.614	MGP_129S1SvImJ_G0025650	Rab14	94	38.614
MGP_129S1SvImJ_G0023887	Rab5a	74	38.125	MGP_129S1SvImJ_G0015902	Rab23	67	38.125
MGP_129S1SvImJ_G0023887	Rab5a	81	37.989	MGP_129S1SvImJ_G0023988	Rab12	62	37.989
MGP_129S1SvImJ_G0023887	Rab5a	74	40.881	MGP_129S1SvImJ_G0019866	Rab15	75	40.881
MGP_129S1SvImJ_G0023887	Rab5a	100	87.500	MGP_129S1SvImJ_G0019167	Rab5c	100	87.500
MGP_129S1SvImJ_G0023887	Rab5a	55	30.159	MGP_129S1SvImJ_G0019699	Arl4a	60	30.159
MGP_129S1SvImJ_G0023887	Rab5a	75	41.566	MGP_129S1SvImJ_G0035694	Rab33a	70	41.566
MGP_129S1SvImJ_G0023887	Rab5a	73	33.121	MGP_129S1SvImJ_G0029356	Rheb	85	33.121
MGP_129S1SvImJ_G0023887	Rab5a	90	40.816	MGP_129S1SvImJ_G0024132	Rab18	93	40.816
MGP_129S1SvImJ_G0023887	Rab5a	82	31.667	MGP_129S1SvImJ_G0033214	Hras	94	31.667
MGP_129S1SvImJ_G0023887	Rab5a	90	49.231	MGP_129S1SvImJ_G0026959	Rab22a	98	49.231
MGP_129S1SvImJ_G0023887	Rab5a	81	43.678	MGP_129S1SvImJ_G0032514	Rab30	86	43.678
MGP_129S1SvImJ_G0023887	Rab5a	95	41.951	MGP_129S1SvImJ_G0019371	Rab37	93	41.951
MGP_129S1SvImJ_G0023887	Rab5a	78	41.916	MGP_129S1SvImJ_G0021294	Rab2b	79	44.079
MGP_129S1SvImJ_G0023887	Rab5a	80	31.667	MGP_129S1SvImJ_G0031479	Kras	94	31.667
MGP_129S1SvImJ_G0023887	Rab5a	76	32.727	MGP_129S1SvImJ_G0027689	Nras	99	34.667
MGP_129S1SvImJ_G0023887	Rab5a	95	42.718	MGP_129S1SvImJ_G0035193	Rab6b	98	42.718
MGP_129S1SvImJ_G0023887	Rab5a	91	41.951	MGP_129S1SvImJ_G0034943	Rab11a	88	48.148
MGP_129S1SvImJ_G0023887	Rab5a	78	31.737	MGP_129S1SvImJ_G0031586	Rasl2-9	76	31.737
MGP_129S1SvImJ_G0023887	Rab5a	75	36.585	MGP_129S1SvImJ_G0035862	Rab39b	77	36.585