EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0024602 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 108364 bases
Position: chr18:83635136-83743499
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	1	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	2	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	3	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	4	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	5	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	6	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	7	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	8	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	9	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	10	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	11	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	12	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	13	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	14	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	15	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	16	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	17	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	18	19
MGP_129S1SvImJ_P0050231	zf-C2H2	PF00096.26	2.3e-110	19	19
MGP_129S1SvImJ_P0050235	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_129S1SvImJ_P0050231	zf-met	PF12874.7	1.1e-05	1	4
MGP_129S1SvImJ_P0050231	zf-met	PF12874.7	1.1e-05	2	4
MGP_129S1SvImJ_P0050231	zf-met	PF12874.7	1.1e-05	3	4
MGP_129S1SvImJ_P0050231	zf-met	PF12874.7	1.1e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0050234	-	665	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0050235	-	404	-	MGP_129S1SvImJ_P0050235	65 (aa)	-	-
MGP_129S1SvImJ_T0050232	-	3228	-	MGP_129S1SvImJ_P0050232	42 (aa)	-	-
MGP_129S1SvImJ_T0050233	-	6079	-	MGP_129S1SvImJ_P0050233	466 (aa)	-	-
MGP_129S1SvImJ_T0050231	-	11555	XM_006526490	MGP_129S1SvImJ_P0050231	1840 (aa)	XP_006526553	B2RR24

Gene Model

Click here to download MGP_129S1SvImJ_G0024602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0024602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0024602	Zfp236	79	38.732	MGP_129S1SvImJ_G0023250	Zfp945	77	45.349
MGP_129S1SvImJ_G0024602	Zfp236	72	37.143	MGP_129S1SvImJ_G0023258	Zscan10	79	37.143
MGP_129S1SvImJ_G0024602	Zfp236	65	44.643	MGP_129S1SvImJ_G0031820	Zfp108	63	41.975
MGP_129S1SvImJ_G0024602	Zfp236	62	42.857	MGP_129S1SvImJ_G0031822	Zfp61	57	47.727
MGP_129S1SvImJ_G0024602	Zfp236	67	42.647	MGP_129S1SvImJ_G0031823	Zfp94	76	42.647
MGP_129S1SvImJ_G0024602	Zfp236	74	42.857	MGP_129S1SvImJ_G0032117	Zfp715	69	41.935
MGP_129S1SvImJ_G0024602	Zfp236	62	43.023	MGP_129S1SvImJ_G0029507	Zbtb49	62	47.887
MGP_129S1SvImJ_G0024602	Zfp236	81	39.437	MGP_129S1SvImJ_G0020716	Zfp748	94	41.905
MGP_129S1SvImJ_G0024602	Zfp236	63	42.500	MGP_129S1SvImJ_G0031853	Zfp574	65	41.304
MGP_129S1SvImJ_G0024602	Zfp236	78	41.667	MGP_129S1SvImJ_G0026930	Zfp64	70	41.667
MGP_129S1SvImJ_G0024602	Zfp236	80	43.902	MGP_129S1SvImJ_G0020699	Zfp759	97	41.525
MGP_129S1SvImJ_G0024602	Zfp236	71	42.056	MGP_129S1SvImJ_G0033764	Zfp709	80	43.750
MGP_129S1SvImJ_G0024602	Zfp236	69	42.727	MGP_129S1SvImJ_G0029048	Zbtb17	58	42.727
MGP_129S1SvImJ_G0024602	Zfp236	60	46.341	MGP_129S1SvImJ_G0032116	Zfp141	55	44.681
MGP_129S1SvImJ_G0024602	Zfp236	79	44.545	MGP_129S1SvImJ_G0026892	Zfp334	68	45.556
MGP_129S1SvImJ_G0024602	Zfp236	61	36.782	MGP_129S1SvImJ_G0016552	Zbtb41	61	38.824
MGP_129S1SvImJ_G0024602	Zfp236	66	45.455	MGP_129S1SvImJ_G0031178	Zfp637	85	51.807
MGP_129S1SvImJ_G0024602	Zfp236	60	36.242	MGP_129S1SvImJ_G0034226	Snai3	57	47.297
MGP_129S1SvImJ_G0024602	Zfp236	69	40.260	MGP_129S1SvImJ_G0031576	Zfp865	78	44.643
MGP_129S1SvImJ_G0024602	Zfp236	55	30.734	MGP_129S1SvImJ_G0031579	Zfp784	79	40.244
MGP_129S1SvImJ_G0024602	Zfp236	63	42.697	MGP_129S1SvImJ_G0018255	Zfp454	75	42.982
MGP_129S1SvImJ_G0024602	Zfp236	90	31.818	MGP_129S1SvImJ_G0017172	Zbtb24	54	45.794
MGP_129S1SvImJ_G0024602	Zfp236	69	40.000	MGP_129S1SvImJ_G0018399	Zfp867	94	44.262
MGP_129S1SvImJ_G0024602	Zfp236	76	34.940	MGP_129S1SvImJ_G0033059	Zfp646	76	34.940
MGP_129S1SvImJ_G0024602	Zfp236	72	42.500	MGP_129S1SvImJ_G0020717	-	99	42.500
MGP_129S1SvImJ_G0024602	Zfp236	63	41.000	MGP_129S1SvImJ_G0020719	Zfp65	98	45.872
MGP_129S1SvImJ_G0024602	Zfp236	62	45.283	MGP_129S1SvImJ_G0020698	Rslcan18	78	45.283
MGP_129S1SvImJ_G0024602	Zfp236	69	45.283	MGP_129S1SvImJ_G0023229	Zfp51	78	45.283
MGP_129S1SvImJ_G0024602	Zfp236	69	42.222	MGP_129S1SvImJ_G0023227	Zfp677	79	42.222
MGP_129S1SvImJ_G0024602	Zfp236	66	38.655	MGP_129S1SvImJ_G0031281	Zfp384	61	38.655
MGP_129S1SvImJ_G0024602	Zfp236	78	40.690	MGP_129S1SvImJ_G0033983	Zfp319	87	41.250
MGP_129S1SvImJ_G0024602	Zfp236	61	41.228	MGP_129S1SvImJ_G0026463	Zfp661	69	42.857
MGP_129S1SvImJ_G0024602	Zfp236	58	42.177	MGP_129S1SvImJ_G0033035	E430018J23Rik	59	42.177
MGP_129S1SvImJ_G0024602	Zfp236	54	46.739	MGP_129S1SvImJ_G0029844	Gfi1	100	46.739
MGP_129S1SvImJ_G0024602	Zfp236	70	40.187	MGP_129S1SvImJ_G0033765	Zfp882	87	44.565
MGP_129S1SvImJ_G0024602	Zfp236	80	41.667	MGP_129S1SvImJ_G0030700	Repin1	99	41.667
MGP_129S1SvImJ_G0024602	Zfp236	77	35.714	MGP_129S1SvImJ_G0030834	Prdm5	86	46.739
MGP_129S1SvImJ_G0024602	Zfp236	81	53.333	MGP_129S1SvImJ_G0026929	Sall4	73	53.333
MGP_129S1SvImJ_G0024602	Zfp236	69	40.559	MGP_129S1SvImJ_G0022013	Zfp251	79	45.536
MGP_129S1SvImJ_G0024602	Zfp236	60	44.318	MGP_129S1SvImJ_G0034481	Zfp872	94	40.800
MGP_129S1SvImJ_G0024602	Zfp236	70	43.636	MGP_129S1SvImJ_G0027122	Mynn	62	48.864
MGP_129S1SvImJ_G0024602	Zfp236	80	46.512	MGP_129S1SvImJ_G0031990	Zfp420	99	47.059
MGP_129S1SvImJ_G0024602	Zfp236	64	40.777	MGP_129S1SvImJ_G0031815	Zfp112	52	42.742
MGP_129S1SvImJ_G0024602	Zfp236	73	43.411	MGP_129S1SvImJ_G0031816	Zfp235	66	43.411
MGP_129S1SvImJ_G0024602	Zfp236	59	41.748	MGP_129S1SvImJ_G0018987	Zfp652	58	41.748
MGP_129S1SvImJ_G0024602	Zfp236	60	44.545	MGP_129S1SvImJ_G0034143	Zfp1	67	44.545
MGP_129S1SvImJ_G0024602	Zfp236	58	45.536	MGP_129S1SvImJ_G0033032	Zfp768	53	45.536
MGP_129S1SvImJ_G0024602	Zfp236	66	53.704	MGP_129S1SvImJ_G0033924	Sall1	67	53.704
MGP_129S1SvImJ_G0024602	Zfp236	68	36.905	MGP_129S1SvImJ_G0018349	Zfp672	96	41.096