EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0024673 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 11072 bases
Position: chr19:1679381-1690452
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0050492	RRM_5	PF13893.6	2.5e-07	1	1
MGP_129S1SvImJ_P0050493	RRM_5	PF13893.6	2.5e-07	1	1
MGP_129S1SvImJ_P0050492	RRM_1	PF00076.22	2e-45	1	3
MGP_129S1SvImJ_P0050492	RRM_1	PF00076.22	2e-45	2	3
MGP_129S1SvImJ_P0050492	RRM_1	PF00076.22	2e-45	3	3
MGP_129S1SvImJ_P0050493	RRM_1	PF00076.22	2e-45	1	3
MGP_129S1SvImJ_P0050493	RRM_1	PF00076.22	2e-45	2	3
MGP_129S1SvImJ_P0050493	RRM_1	PF00076.22	2e-45	3	3
MGP_129S1SvImJ_P0050495	RRM_1	PF00076.22	4.6e-12	1	1
MGP_129S1SvImJ_P0050489	RRM_1	PF00076.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0050489	-	2486	-	MGP_129S1SvImJ_P0050489	319 (aa)	-	-
MGP_129S1SvImJ_T0050496	-	2841	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0050495	-	614	-	MGP_129S1SvImJ_P0050495	186 (aa)	-	-
MGP_129S1SvImJ_T0050492	-	1153	-	MGP_129S1SvImJ_P0050492	188 (aa)	-	-
MGP_129S1SvImJ_T0050493	-	936	-	MGP_129S1SvImJ_P0050493	188 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0024673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0024673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0024673	-	70	30.405	MGP_129S1SvImJ_G0030975	Tia1	85	30.405
MGP_129S1SvImJ_G0024673	-	70	30.345	MGP_129S1SvImJ_G0033083	Tial1	84	30.088
MGP_129S1SvImJ_G0024673	-	59	33.036	MGP_129S1SvImJ_G0021397	Pspc1	91	36.667
MGP_129S1SvImJ_G0024673	-	100	100.000	MGP_129S1SvImJ_G0024671	Gm21992	73	100.000
MGP_129S1SvImJ_G0024673	-	97	43.750	MGP_129S1SvImJ_G0024674	Rbm14	94	42.105