EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_129S1SvImJ_G0024807 (Gene tree)
Gene ID
-
Gene Symbol
Nxf1
Alias
0610006I08Rik|Mex67|Mvb1|TAP|Tap|Tip associated protein
Full Name
nuclear RNA export factor 1
Gene Type
protein_coding
Species
Mus_musculus_129s1svimj
Status
putative
Strand
Plus strand
Length
18065 bases
Position
chr19:6030819-6048883
Accession
1858330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_129S1SvImJ_P0050979Tap-RNA_bindPF09162.101.6e-3811
MGP_129S1SvImJ_P0050980Tap-RNA_bindPF09162.101.8e-3811
MGP_129S1SvImJ_P0050982Tap-RNA_bindPF09162.101.1e-2211
MGP_129S1SvImJ_P0050988TAP_CPF03943.137.1e-2611
MGP_129S1SvImJ_P0050979TAP_CPF03943.131.8e-2411
MGP_129S1SvImJ_P0050979NTF2PF02136.209.1e-2711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_129S1SvImJ_T0050988-505-MGP_129S1SvImJ_P005098888 (aa)--
MGP_129S1SvImJ_T0050989-431--- (aa)--
MGP_129S1SvImJ_T0050984-236-MGP_129S1SvImJ_P005098478 (aa)--
MGP_129S1SvImJ_T0050979-2326-MGP_129S1SvImJ_P0050979618 (aa)-Q99JX7
MGP_129S1SvImJ_T0050986-1910-MGP_129S1SvImJ_P0050986251 (aa)--
MGP_129S1SvImJ_T0050987-519--- (aa)--
MGP_129S1SvImJ_T0050980-5430-MGP_129S1SvImJ_P0050980418 (aa)--
MGP_129S1SvImJ_T0050981-590--- (aa)--
MGP_129S1SvImJ_T0050982-1017-MGP_129S1SvImJ_P0050982282 (aa)--
MGP_129S1SvImJ_T0050983-567-MGP_129S1SvImJ_P005098375 (aa)--
MGP_129S1SvImJ_T0050985-927--- (aa)--
MGP_129S1SvImJ_T0050990-474--- (aa)--
Gene Model
Click here to download MGP_129S1SvImJ_G0024807's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0024807's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_129S1SvImJ_G0024807Nxf16556.044MGP_129S1SvImJ_G0036085-9734.868
MGP_129S1SvImJ_G0024807Nxf19856.504MGP_129S1SvImJ_G0036079Nxf28254.887
MGP_129S1SvImJ_G0024807Nxf19948.000MGP_129S1SvImJ_G0036093Nxf39138.475

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