EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0025005 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 193880 bases
Position: chr19:24929119-25122998
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0051398	ResIII	PF04851.15	3.9e-08	1	1
MGP_129S1SvImJ_P0051399	ResIII	PF04851.15	4e-08	1	1
MGP_129S1SvImJ_P0051401	ResIII	PF04851.15	2.1e-06	1	1
MGP_129S1SvImJ_P0051401	BRK	PF07533.16	3.6e-17	1	1
MGP_129S1SvImJ_P0051398	BRK	PF07533.16	3.7e-17	1	1
MGP_129S1SvImJ_P0051399	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0051416	-	736	-	MGP_129S1SvImJ_P0051416	119 (aa)	-	-
MGP_129S1SvImJ_T0051398	-	5852	XM_006527281	MGP_129S1SvImJ_P0051398	1585 (aa)	XP_006527344	A0A140LHE2
MGP_129S1SvImJ_T0051399	-	5856	-	MGP_129S1SvImJ_P0051399	1603 (aa)	-	-
MGP_129S1SvImJ_T0051411	-	1846	-	MGP_129S1SvImJ_P0051411	236 (aa)	-	-
MGP_129S1SvImJ_T0051410	-	879	-	MGP_129S1SvImJ_P0051410	276 (aa)	-	-
MGP_129S1SvImJ_T0051413	-	485	-	MGP_129S1SvImJ_P0051413	83 (aa)	-	-
MGP_129S1SvImJ_T0051412	-	835	-	MGP_129S1SvImJ_P0051412	235 (aa)	-	-
MGP_129S1SvImJ_T0051415	-	956	-	MGP_129S1SvImJ_P0051415	119 (aa)	-	-
MGP_129S1SvImJ_T0051414	-	1448	-	MGP_129S1SvImJ_P0051414	113 (aa)	-	-
MGP_129S1SvImJ_T0051408	-	942	-	MGP_129S1SvImJ_P0051408	254 (aa)	-	-
MGP_129S1SvImJ_T0051409	-	788	-	MGP_129S1SvImJ_P0051409	224 (aa)	-	-
MGP_129S1SvImJ_T0051406	-	426	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0051407	-	929	-	MGP_129S1SvImJ_P0051407	254 (aa)	-	-
MGP_129S1SvImJ_T0051404	-	1584	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0051405	-	867	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0051402	-	651	-	MGP_129S1SvImJ_P0051402	175 (aa)	-	-
MGP_129S1SvImJ_T0051403	-	661	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0051400	-	5907	-	MGP_129S1SvImJ_P0051400	1512 (aa)	-	-
MGP_129S1SvImJ_T0051401	-	4584	-	MGP_129S1SvImJ_P0051401	1527 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0025005	Smarca2	96	73.829	MGP_129S1SvImJ_G0034459	Smarca4	92	79.726