EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0025077 (Gene tree)
Gene ID: -
Gene Symbol: Cpeb3
Alias: 4831444O18Rik|CPE-BP3|mKIAA0940
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 200340 bases
Position: chr19:35949326-36149665
Accession: 2443075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0051619	RRM_1	PF00076.22	7.8e-12	1	1
MGP_129S1SvImJ_P0051624	RRM_1	PF00076.22	3e-11	1	1
MGP_129S1SvImJ_P0051622	RRM_1	PF00076.22	3e-11	1	1
MGP_129S1SvImJ_P0051621	RRM_1	PF00076.22	3.1e-11	1	1
MGP_129S1SvImJ_P0051618	RRM_1	PF00076.22	3.3e-11	1	1
MGP_129S1SvImJ_P0051620	RRM_1	PF00076.22	3.3e-11	1	1
MGP_129S1SvImJ_P0051623	RRM_1	PF00076.22	3.3e-11	1	1
MGP_129S1SvImJ_P0051625	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0051619	-	4812	-	MGP_129S1SvImJ_P0051619	415 (aa)	-	-
MGP_129S1SvImJ_T0051618	-	5900	XM_006526829	MGP_129S1SvImJ_P0051618	716 (aa)	XP_006526892	Q7TN99
MGP_129S1SvImJ_T0051626	-	659	-	MGP_129S1SvImJ_P0051626	179 (aa)	-	-
MGP_129S1SvImJ_T0051627	-	557	-	MGP_129S1SvImJ_P0051627	127 (aa)	-	-
MGP_129S1SvImJ_T0051624	-	2411	-	MGP_129S1SvImJ_P0051624	685 (aa)	-	-
MGP_129S1SvImJ_T0051625	-	2095	-	MGP_129S1SvImJ_P0051625	561 (aa)	-	-
MGP_129S1SvImJ_T0051622	-	4225	-	MGP_129S1SvImJ_P0051622	693 (aa)	-	-
MGP_129S1SvImJ_T0051623	-	3148	-	MGP_129S1SvImJ_P0051623	716 (aa)	-	-
MGP_129S1SvImJ_T0051620	-	5672	-	MGP_129S1SvImJ_P0051620	716 (aa)	-	-
MGP_129S1SvImJ_T0051621	-	5261	-	MGP_129S1SvImJ_P0051621	699 (aa)	-	-
MGP_129S1SvImJ_T0051628	-	665	-	MGP_129S1SvImJ_P0051628	117 (aa)	-	-
MGP_129S1SvImJ_T0051629	-	450	-	MGP_129S1SvImJ_P0051629	95 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0025077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0025077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0025077	Cpeb3	100	75.418	MGP_129S1SvImJ_G0018123	Cpeb4	99	80.250
MGP_129S1SvImJ_G0025077	Cpeb3	100	78.037	MGP_129S1SvImJ_G0029521	Cpeb2	99	61.736