EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0025332 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 994960 bases
Position: chr2:3719904-4714863
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0052457	RRM_1	PF00076.22	2.5e-51	1	3
MGP_129S1SvImJ_P0052457	RRM_1	PF00076.22	2.5e-51	2	3
MGP_129S1SvImJ_P0052457	RRM_1	PF00076.22	2.5e-51	3	3
MGP_129S1SvImJ_P0052459	RRM_1	PF00076.22	2.5e-51	1	3
MGP_129S1SvImJ_P0052459	RRM_1	PF00076.22	2.5e-51	2	3
MGP_129S1SvImJ_P0052459	RRM_1	PF00076.22	2.5e-51	3	3
MGP_129S1SvImJ_P0052466	RRM_1	PF00076.22	2.6e-51	1	3
MGP_129S1SvImJ_P0052466	RRM_1	PF00076.22	2.6e-51	2	3
MGP_129S1SvImJ_P0052466	RRM_1	PF00076.22	2.6e-51	3	3
MGP_129S1SvImJ_P0052468	RRM_1	PF00076.22	2.6e-51	1	3
MGP_129S1SvImJ_P0052468	RRM_1	PF00076.22	2.6e-51	2	3
MGP_129S1SvImJ_P0052468	RRM_1	PF00076.22	2.6e-51	3	3
MGP_129S1SvImJ_P0052467	RRM_1	PF00076.22	2.7e-51	1	3
MGP_129S1SvImJ_P0052467	RRM_1	PF00076.22	2.7e-51	2	3
MGP_129S1SvImJ_P0052467	RRM_1	PF00076.22	2.7e-51	3	3
MGP_129S1SvImJ_P0052463	RRM_1	PF00076.22	3.1e-51	1	3
MGP_129S1SvImJ_P0052463	RRM_1	PF00076.22	3.1e-51	2	3
MGP_129S1SvImJ_P0052463	RRM_1	PF00076.22	3.1e-51	3	3
MGP_129S1SvImJ_P0052458	RRM_1	PF00076.22	3.3e-51	1	3
MGP_129S1SvImJ_P0052458	RRM_1	PF00076.22	3.3e-51	2	3
MGP_129S1SvImJ_P0052458	RRM_1	PF00076.22	3.3e-51	3	3
MGP_129S1SvImJ_P0052461	RRM_1	PF00076.22	3.3e-51	1	3
MGP_129S1SvImJ_P0052461	RRM_1	PF00076.22	3.3e-51	2	3
MGP_129S1SvImJ_P0052461	RRM_1	PF00076.22	3.3e-51	3	3
MGP_129S1SvImJ_P0052464	RRM_1	PF00076.22	3.4e-51	1	3
MGP_129S1SvImJ_P0052464	RRM_1	PF00076.22	3.4e-51	2	3
MGP_129S1SvImJ_P0052464	RRM_1	PF00076.22	3.4e-51	3	3
MGP_129S1SvImJ_P0052465	RRM_1	PF00076.22	4.9e-39	1	3
MGP_129S1SvImJ_P0052465	RRM_1	PF00076.22	4.9e-39	2	3
MGP_129S1SvImJ_P0052465	RRM_1	PF00076.22	4.9e-39	3	3
MGP_129S1SvImJ_P0052469	RRM_1	PF00076.22	5.9e-39	1	3
MGP_129S1SvImJ_P0052469	RRM_1	PF00076.22	5.9e-39	2	3
MGP_129S1SvImJ_P0052469	RRM_1	PF00076.22	5.9e-39	3	3
MGP_129S1SvImJ_P0052460	RRM_1	PF00076.22	6.2e-39	1	3
MGP_129S1SvImJ_P0052460	RRM_1	PF00076.22	6.2e-39	2	3
MGP_129S1SvImJ_P0052460	RRM_1	PF00076.22	6.2e-39	3	3
MGP_129S1SvImJ_P0052462	RRM_1	PF00076.22	6.6e-39	1	3
MGP_129S1SvImJ_P0052462	RRM_1	PF00076.22	6.6e-39	2	3
MGP_129S1SvImJ_P0052462	RRM_1	PF00076.22	6.6e-39	3	3
MGP_129S1SvImJ_P0052476	RRM_1	PF00076.22	7.5e-19	1	1
MGP_129S1SvImJ_P0052472	RRM_1	PF00076.22	2.4e-15	1	1
MGP_129S1SvImJ_P0052479	RRM_1	PF00076.22	2.2e-14	1	1
MGP_129S1SvImJ_P0052481	RRM_1	PF00076.22	1.1e-13	1	1
MGP_129S1SvImJ_P0052482	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0052484	-	769	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052483	-	1972	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052482	-	331	-	MGP_129S1SvImJ_P0052482	46 (aa)	-	-
MGP_129S1SvImJ_T0052481	-	529	-	MGP_129S1SvImJ_P0052481	159 (aa)	-	-
MGP_129S1SvImJ_T0052480	-	4143	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052478	-	2075	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052479	-	402	-	MGP_129S1SvImJ_P0052479	92 (aa)	-	-
MGP_129S1SvImJ_T0052457	-	7708	XM_006497333	MGP_129S1SvImJ_P0052457	484 (aa)	XP_006497396	Q9Z0H4
MGP_129S1SvImJ_T0052472	-	1024	-	MGP_129S1SvImJ_P0052472	276 (aa)	-	-
MGP_129S1SvImJ_T0052473	-	4798	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052470	-	1996	-	MGP_129S1SvImJ_P0052470	443 (aa)	-	-
MGP_129S1SvImJ_T0052471	-	1240	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052476	-	630	-	MGP_129S1SvImJ_P0052476	134 (aa)	-	-
MGP_129S1SvImJ_T0052477	-	4802	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052474	-	405	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052475	-	923	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052458	-	8679	-	MGP_129S1SvImJ_P0052458	526 (aa)	-	-
MGP_129S1SvImJ_T0052459	-	7481	-	MGP_129S1SvImJ_P0052459	484 (aa)	-	-
MGP_129S1SvImJ_T0052469	-	2127	-	MGP_129S1SvImJ_P0052469	460 (aa)	-	-
MGP_129S1SvImJ_T0052468	-	2283	-	MGP_129S1SvImJ_P0052468	488 (aa)	-	-
MGP_129S1SvImJ_T0052465	-	2223	-	MGP_129S1SvImJ_P0052465	440 (aa)	-	-
MGP_129S1SvImJ_T0052464	-	2525	-	MGP_129S1SvImJ_P0052464	520 (aa)	-	-
MGP_129S1SvImJ_T0052467	-	2289	-	MGP_129S1SvImJ_P0052467	490 (aa)	-	-
MGP_129S1SvImJ_T0052466	-	1721	-	MGP_129S1SvImJ_P0052466	488 (aa)	-	-
MGP_129S1SvImJ_T0052461	-	5471	-	MGP_129S1SvImJ_P0052461	526 (aa)	-	-
MGP_129S1SvImJ_T0052460	-	8797	-	MGP_129S1SvImJ_P0052460	478 (aa)	-	-
MGP_129S1SvImJ_T0052463	-	3538	-	MGP_129S1SvImJ_P0052463	508 (aa)	-	-
MGP_129S1SvImJ_T0052462	-	3853	-	MGP_129S1SvImJ_P0052462	472 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0025332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0025332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0025332	Celf2	87	33.333	MGP_129S1SvImJ_G0028445	Elavl2	83	39.506
MGP_129S1SvImJ_G0025332	Celf2	59	37.500	MGP_129S1SvImJ_G0028739	Pabpc4	51	37.500
MGP_129S1SvImJ_G0025332	Celf2	61	35.714	MGP_129S1SvImJ_G0016035	Boll	57	32.000
MGP_129S1SvImJ_G0025332	Celf2	77	39.474	MGP_129S1SvImJ_G0017849	Rbms2	51	39.474
MGP_129S1SvImJ_G0025332	Celf2	94	83.333	MGP_129S1SvImJ_G0027553	Celf3	99	45.783
MGP_129S1SvImJ_G0025332	Celf2	57	34.884	MGP_129S1SvImJ_G0026834	Pabpc1l	53	34.884
MGP_129S1SvImJ_G0025332	Celf2	57	35.714	MGP_129S1SvImJ_G0021796	Pabpc1	51	34.884
MGP_129S1SvImJ_G0025332	Celf2	61	34.177	MGP_129S1SvImJ_G0033083	Tial1	65	31.481
MGP_129S1SvImJ_G0025332	Celf2	82	34.667	MGP_129S1SvImJ_G0034474	Elavl3	73	40.741
MGP_129S1SvImJ_G0025332	Celf2	77	35.211	MGP_129S1SvImJ_G0033806	-	59	30.000
MGP_129S1SvImJ_G0025332	Celf2	51	35.443	MGP_129S1SvImJ_G0030975	Tia1	83	35.443
MGP_129S1SvImJ_G0025332	Celf2	61	38.272	MGP_129S1SvImJ_G0028576	Elavl4	81	38.272
MGP_129S1SvImJ_G0025332	Celf2	90	55.556	MGP_129S1SvImJ_G0024209	Celf4	95	46.304
MGP_129S1SvImJ_G0025332	Celf2	77	39.474	MGP_129S1SvImJ_G0035401	Rbms3	75	37.079
MGP_129S1SvImJ_G0025332	Celf2	92	53.659	MGP_129S1SvImJ_G0017560	Celf5	93	59.770
MGP_129S1SvImJ_G0025332	Celf2	88	32.099	MGP_129S1SvImJ_G0035748	Rbmx	78	30.000
MGP_129S1SvImJ_G0025332	Celf2	100	88.060	MGP_129S1SvImJ_G0026137	Celf1	100	80.082
MGP_129S1SvImJ_G0025332	Celf2	57	34.211	MGP_129S1SvImJ_G0023139	Pabpc6	51	34.211
MGP_129S1SvImJ_G0025332	Celf2	64	43.210	MGP_129S1SvImJ_G0033333	Elavl1	81	43.210
MGP_129S1SvImJ_G0025332	Celf2	82	33.333	MGP_129S1SvImJ_G0017486	Cirbp	80	32.558
MGP_129S1SvImJ_G0025332	Celf2	79	80.952	MGP_129S1SvImJ_G0034902	Celf6	91	45.567