EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0025366 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 33053 bases
Position: chr2:12600906-12633958
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0052693	MMR_HSR1	PF01926.23	8.5e-07	1	1
MGP_129S1SvImJ_P0052695	MMR_HSR1	PF01926.23	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0052693	-	6925	XM_017319316	MGP_129S1SvImJ_P0052693	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_129S1SvImJ_T0052696	-	1035	-	MGP_129S1SvImJ_P0052696	40 (aa)	-	-
MGP_129S1SvImJ_T0052697	-	481	-	MGP_129S1SvImJ_P0052697	35 (aa)	-	-
MGP_129S1SvImJ_T0052695	-	6973	-	MGP_129S1SvImJ_P0052695	180 (aa)	-	-
MGP_129S1SvImJ_T0052698	-	778	-	MGP_129S1SvImJ_P0052698	30 (aa)	-	-
MGP_129S1SvImJ_T0052699	-	3210	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0052700	-	706	-	MGP_129S1SvImJ_P0052700	56 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0025366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0025366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0025366	Arl5b	67	30.952	MGP_129S1SvImJ_G0026959	Rab22a	61	30.952
MGP_129S1SvImJ_G0025366	Arl5b	94	39.759	MGP_129S1SvImJ_G0019210	Arl4d	83	39.759
MGP_129S1SvImJ_G0025366	Arl5b	93	40.000	MGP_129S1SvImJ_G0021439	Arl11	91	40.000
MGP_129S1SvImJ_G0025366	Arl5b	98	49.718	MGP_129S1SvImJ_G0019271	Arf2	98	49.718
MGP_129S1SvImJ_G0025366	Arl5b	84	33.562	MGP_129S1SvImJ_G0016517	Arl8a	78	33.553
MGP_129S1SvImJ_G0025366	Arl5b	96	37.500	MGP_129S1SvImJ_G0027294	Arl14	90	37.500
MGP_129S1SvImJ_G0025366	Arl5b	98	49.718	MGP_129S1SvImJ_G0022309	Arf3	98	49.718
MGP_129S1SvImJ_G0025366	Arl5b	98	81.437	MGP_129S1SvImJ_G0025734	Arl5a	100	79.888
MGP_129S1SvImJ_G0025366	Arl5b	98	50.282	MGP_129S1SvImJ_G0018393	Arf1	98	50.282
MGP_129S1SvImJ_G0025366	Arl5b	94	51.250	MGP_129S1SvImJ_G0017631	Arl1	93	50.000
MGP_129S1SvImJ_G0025366	Arl5b	92	39.506	MGP_129S1SvImJ_G0022932	Arl6	89	39.157
MGP_129S1SvImJ_G0025366	Arl5b	83	30.667	MGP_129S1SvImJ_G0031102	Arl8b	78	30.667
MGP_129S1SvImJ_G0025366	Arl5b	99	44.444	MGP_129S1SvImJ_G0030508	Arf5	100	44.444
MGP_129S1SvImJ_G0025366	Arl5b	96	44.512	MGP_129S1SvImJ_G0024751	Arl2	90	44.242
MGP_129S1SvImJ_G0025366	Arl5b	92	37.126	MGP_129S1SvImJ_G0027020	Arfrp1	84	40.196
MGP_129S1SvImJ_G0025366	Arl5b	99	43.094	MGP_129S1SvImJ_G0025211	Arl3	99	43.094
MGP_129S1SvImJ_G0025366	Arl5b	90	42.593	MGP_129S1SvImJ_G0016288	Arl4c	85	42.169
MGP_129S1SvImJ_G0025366	Arl5b	65	34.211	MGP_129S1SvImJ_G0020571	Arl10	55	34.211
MGP_129S1SvImJ_G0025366	Arl5b	97	74.286	MGP_129S1SvImJ_G0019046	Arl5c	98	74.286
MGP_129S1SvImJ_G0025366	Arl5b	94	43.373	MGP_129S1SvImJ_G0019699	Arl4a	85	43.787