EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0025586 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 49113 bases
Position: chr2:29922265-29971377
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0053973	KH_1	PF00013.29	1e-68	1	4
MGP_129S1SvImJ_P0053973	KH_1	PF00013.29	1e-68	2	4
MGP_129S1SvImJ_P0053973	KH_1	PF00013.29	1e-68	3	4
MGP_129S1SvImJ_P0053973	KH_1	PF00013.29	1e-68	4	4
MGP_129S1SvImJ_P0053977	KH_1	PF00013.29	1.1e-68	1	4
MGP_129S1SvImJ_P0053977	KH_1	PF00013.29	1.1e-68	2	4
MGP_129S1SvImJ_P0053977	KH_1	PF00013.29	1.1e-68	3	4
MGP_129S1SvImJ_P0053977	KH_1	PF00013.29	1.1e-68	4	4
MGP_129S1SvImJ_P0053980	KH_1	PF00013.29	7.6e-19	1	1
MGP_129S1SvImJ_P0053976	KH_1	PF00013.29	8.1e-11	1	1
MGP_129S1SvImJ_P0053973	KH_2	PF07650.17	7.8e-21	1	1
MGP_129S1SvImJ_P0053977	KH_2	PF07650.17	8e-21	1	1
MGP_129S1SvImJ_P0053980	KH_2	PF07650.17	1.4e-05	1	1
MGP_129S1SvImJ_P0053981	DUF1897	PF09005.10	4.2e-09	1	2
MGP_129S1SvImJ_P0053981	DUF1897	PF09005.10	4.2e-09	2	2
MGP_129S1SvImJ_P0053982	DUF1897	PF09005.10	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0053981	-	838	-	MGP_129S1SvImJ_P0053981	103 (aa)	-	-
MGP_129S1SvImJ_T0053980	-	1073	-	MGP_129S1SvImJ_P0053980	263 (aa)	-	-
MGP_129S1SvImJ_T0053983	-	2337	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0053982	-	437	-	MGP_129S1SvImJ_P0053982	52 (aa)	-	-
MGP_129S1SvImJ_T0053978	-	453	-	MGP_129S1SvImJ_P0053978	83 (aa)	-	-
MGP_129S1SvImJ_T0053979	-	908	-	MGP_129S1SvImJ_P0053979	191 (aa)	-	-
MGP_129S1SvImJ_T0053973	-	3263	XM_006498126	MGP_129S1SvImJ_P0053973	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_129S1SvImJ_T0053974	-	372	-	MGP_129S1SvImJ_P0053974	97 (aa)	-	-
MGP_129S1SvImJ_T0053975	-	1909	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0053976	-	425	-	MGP_129S1SvImJ_P0053976	123 (aa)	-	-
MGP_129S1SvImJ_T0053977	-	3643	-	MGP_129S1SvImJ_P0053977	575 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0025586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0025586	Fubp3	95	58.824	MGP_129S1SvImJ_G0023949	Khsrp	84	48.682
MGP_129S1SvImJ_G0025586	Fubp3	79	31.707	MGP_129S1SvImJ_G0027549	Tdrkh	74	31.707
MGP_129S1SvImJ_G0025586	Fubp3	88	32.370	MGP_129S1SvImJ_G0030978	Pcbp1	60	31.169
MGP_129S1SvImJ_G0025586	Fubp3	96	64.324	MGP_129S1SvImJ_G0027988	Fubp1	94	59.208
MGP_129S1SvImJ_G0025586	Fubp3	77	31.973	MGP_129S1SvImJ_G0017390	Pcbp3	85	31.973
MGP_129S1SvImJ_G0025586	Fubp3	58	30.000	MGP_129S1SvImJ_G0022666	Igf2bp2	66	30.000
MGP_129S1SvImJ_G0025586	Fubp3	70	36.000	MGP_129S1SvImJ_G0035232	Pcbp4	83	36.000