EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0025764 (Gene tree)
Gene ID: -
Gene Symbol: Rbms1
Alias: 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|Mssp|Mssp1|YC1
Full Name: RNA binding motif%2C single stranded interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 225380 bases
Position: chr2:60354963-60580342
Accession: 1861774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0054939	RRM_1	PF00076.22	1.7e-32	1	2
MGP_129S1SvImJ_P0054939	RRM_1	PF00076.22	1.7e-32	2	2
MGP_129S1SvImJ_P0054938	RRM_1	PF00076.22	1.8e-32	1	2
MGP_129S1SvImJ_P0054938	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0054939	-	4434	-	MGP_129S1SvImJ_P0054939	403 (aa)	-	-
MGP_129S1SvImJ_T0054938	-	4055	XM_006499940	MGP_129S1SvImJ_P0054938	417 (aa)	XP_006500003	Q91W59
MGP_129S1SvImJ_T0054944	-	202	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0054945	-	123	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0054940	-	644	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0054941	-	757	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0054942	-	224	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0054943	-	217	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0025764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0025764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0025764	Rbms1	53	32.773	MGP_129S1SvImJ_G0028576	Elavl4	70	36.458
MGP_129S1SvImJ_G0025764	Rbms1	51	33.645	MGP_129S1SvImJ_G0034474	Elavl3	50	36.207
MGP_129S1SvImJ_G0025764	Rbms1	96	71.538	MGP_129S1SvImJ_G0035401	Rbms3	99	80.841
MGP_129S1SvImJ_G0025764	Rbms1	94	68.063	MGP_129S1SvImJ_G0017849	Rbms2	86	71.758