EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0026137 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 90461 bases
Position: chr2:92229619-92320079
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0056015	RRM_1	PF00076.22	4.1e-52	1	3
MGP_129S1SvImJ_P0056015	RRM_1	PF00076.22	4.1e-52	2	3
MGP_129S1SvImJ_P0056015	RRM_1	PF00076.22	4.1e-52	3	3
MGP_129S1SvImJ_P0056009	RRM_1	PF00076.22	4.2e-52	1	3
MGP_129S1SvImJ_P0056009	RRM_1	PF00076.22	4.2e-52	2	3
MGP_129S1SvImJ_P0056009	RRM_1	PF00076.22	4.2e-52	3	3
MGP_129S1SvImJ_P0056014	RRM_1	PF00076.22	5.2e-52	1	3
MGP_129S1SvImJ_P0056014	RRM_1	PF00076.22	5.2e-52	2	3
MGP_129S1SvImJ_P0056014	RRM_1	PF00076.22	5.2e-52	3	3
MGP_129S1SvImJ_P0056012	RRM_1	PF00076.22	6.7e-52	1	3
MGP_129S1SvImJ_P0056012	RRM_1	PF00076.22	6.7e-52	2	3
MGP_129S1SvImJ_P0056012	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0056014	-	7579	-	MGP_129S1SvImJ_P0056014	513 (aa)	-	-
MGP_129S1SvImJ_T0056015	-	4432	-	MGP_129S1SvImJ_P0056015	483 (aa)	-	-
MGP_129S1SvImJ_T0056016	-	489	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056010	-	426	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056011	-	478	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056012	-	7008	-	MGP_129S1SvImJ_P0056012	543 (aa)	-	-
MGP_129S1SvImJ_T0056013	-	271	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056009	-	7851	-	MGP_129S1SvImJ_P0056009	487 (aa)	-	-
MGP_129S1SvImJ_T0056008	-	350	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0026137	Celf1	69	41.975	MGP_129S1SvImJ_G0028445	Elavl2	85	41.975
MGP_129S1SvImJ_G0026137	Celf1	57	37.879	MGP_129S1SvImJ_G0027190	Pabpc4l	65	34.211
MGP_129S1SvImJ_G0026137	Celf1	100	80.082	MGP_129S1SvImJ_G0025332	Celf2	100	88.060
MGP_129S1SvImJ_G0026137	Celf1	77	37.292	MGP_129S1SvImJ_G0017560	Celf5	93	56.322
MGP_129S1SvImJ_G0026137	Celf1	98	45.135	MGP_129S1SvImJ_G0034902	Celf6	91	45.549
MGP_129S1SvImJ_G0026137	Celf1	100	45.200	MGP_129S1SvImJ_G0024209	Celf4	100	42.430
MGP_129S1SvImJ_G0026137	Celf1	62	40.741	MGP_129S1SvImJ_G0028576	Elavl4	78	40.741
MGP_129S1SvImJ_G0026137	Celf1	97	43.320	MGP_129S1SvImJ_G0027553	Celf3	99	43.830
MGP_129S1SvImJ_G0026137	Celf1	57	43.590	MGP_129S1SvImJ_G0034474	Elavl3	71	42.391
MGP_129S1SvImJ_G0026137	Celf1	52	35.526	MGP_129S1SvImJ_G0023139	Pabpc6	53	35.526
MGP_129S1SvImJ_G0026137	Celf1	53	43.421	MGP_129S1SvImJ_G0035401	Rbms3	68	43.421
MGP_129S1SvImJ_G0026137	Celf1	70	38.636	MGP_129S1SvImJ_G0028739	Pabpc4	88	32.258
MGP_129S1SvImJ_G0026137	Celf1	61	45.679	MGP_129S1SvImJ_G0033333	Elavl1	83	45.679