EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0026207 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 41383 bases
Position: chr2:105752128-105793510
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0056447	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_129S1SvImJ_P0056448	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_129S1SvImJ_P0056449	Caprin-1_C	PF12287.8	3.3e-90	1	1
MGP_129S1SvImJ_P0056454	Caprin-1_C	PF12287.8	2.8e-25	1	1
MGP_129S1SvImJ_P0056450	Caprin-1_C	PF12287.8	3.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0056461	-	626	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056460	-	391	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056454	-	760	-	MGP_129S1SvImJ_P0056454	253 (aa)	-	-
MGP_129S1SvImJ_T0056458	-	555	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056459	-	828	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056449	-	1923	-	MGP_129S1SvImJ_P0056449	213 (aa)	-	-
MGP_129S1SvImJ_T0056448	-	4068	-	MGP_129S1SvImJ_P0056448	707 (aa)	-	-
MGP_129S1SvImJ_T0056447	-	6168	XM_006499902	MGP_129S1SvImJ_P0056447	707 (aa)	XP_006499965	Q60865
MGP_129S1SvImJ_T0056455	-	570	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056456	-	479	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056457	-	879	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056450	-	856	-	MGP_129S1SvImJ_P0056450	93 (aa)	-	-
MGP_129S1SvImJ_T0056451	-	816	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056452	-	937	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0056453	-	809	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0026207	Caprin1	89	44.275	MGP_129S1SvImJ_G0031505	Caprin2	91	38.415