EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0026497 (Gene tree)
Gene ID: -
Gene Symbol: Nop56
Alias: 2310044F10Rik|56kDa with KKE/D repeat|NOP56|Nol5a
Full Name: NOP56 ribonucleoprotein
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 4890 bases
Position: chr2:133723166-133728055
Accession: 1914384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0057635	Nop	PF01798.18	3.2e-87	1	1
MGP_129S1SvImJ_P0057631	Nop	PF01798.18	5e-87	1	1
MGP_129S1SvImJ_P0057648	Nop	PF01798.18	8.5e-23	1	1
MGP_129S1SvImJ_P0057645	Nop	PF01798.18	6.6e-22	1	1
MGP_129S1SvImJ_P0057634	Nop	PF01798.18	2.6e-17	1	1
MGP_129S1SvImJ_P0057636	NOP5NT	PF08156.13	1.1e-17	1	1
MGP_129S1SvImJ_P0057634	NOP5NT	PF08156.13	2e-17	1	1
MGP_129S1SvImJ_P0057631	NOP5NT	PF08156.13	2.2e-17	1	1
MGP_129S1SvImJ_P0057635	NOP5NT	PF08156.13	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0057633	-	2960	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057632	-	3586	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057631	-	1880	XM_006500062	MGP_129S1SvImJ_P0057631	581 (aa)	XP_006500125	Q9D6Z1
MGP_129S1SvImJ_T0057645	-	905	-	MGP_129S1SvImJ_P0057645	282 (aa)	-	-
MGP_129S1SvImJ_T0057637	-	353	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057636	-	518	-	MGP_129S1SvImJ_P0057636	172 (aa)	-	-
MGP_129S1SvImJ_T0057635	-	1434	-	MGP_129S1SvImJ_P0057635	477 (aa)	-	-
MGP_129S1SvImJ_T0057634	-	868	-	MGP_129S1SvImJ_P0057634	261 (aa)	-	-
MGP_129S1SvImJ_T0057639	-	829	-	MGP_129S1SvImJ_P0057639	124 (aa)	-	-
MGP_129S1SvImJ_T0057638	-	320	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057640	-	571	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057648	-	405	-	MGP_129S1SvImJ_P0057648	135 (aa)	-	-
MGP_129S1SvImJ_T0057649	-	738	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057644	-	1163	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057647	-	833	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057642	-	600	-	MGP_129S1SvImJ_P0057642	17 (aa)	-	-
MGP_129S1SvImJ_T0057646	-	964	-	MGP_129S1SvImJ_P0057646	172 (aa)	-	-
MGP_129S1SvImJ_T0057641	-	741	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057643	-	445	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0026497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0026497	Nop56	94	41.525	MGP_129S1SvImJ_G0016069	Nop58	93	45.355