EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0026574 (Gene tree)
Gene ID: -
Gene Symbol: Snrpb2
Alias: 2810052G09Rik
Full Name: U2 small nuclear ribonucleoprotein B
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 9809 bases
Position: chr2:147074399-147084207
Accession: 104805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0057993	RRM_5	PF13893.6	8.4e-07	1	2
MGP_129S1SvImJ_P0057993	RRM_5	PF13893.6	8.4e-07	2	2
MGP_129S1SvImJ_P0057993	RRM_1	PF00076.22	2.9e-25	1	2
MGP_129S1SvImJ_P0057993	RRM_1	PF00076.22	2.9e-25	2	2
MGP_129S1SvImJ_P0057995	RRM_1	PF00076.22	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0057993	-	2061	-	MGP_129S1SvImJ_P0057993	225 (aa)	-	Q9CQI7
MGP_129S1SvImJ_T0057996	-	594	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057997	-	1827	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057994	-	686	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0057995	-	636	-	MGP_129S1SvImJ_P0057995	143 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0026574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0026574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0026574	Snrpb2	65	48.000	MGP_129S1SvImJ_G0035183	Gm5145	100	48.000
MGP_129S1SvImJ_G0026574	Snrpb2	99	63.121	MGP_129S1SvImJ_G0031901	Snrpa	97	55.235