EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0026610 (Gene tree)
Gene ID: -
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336|mGZF1
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 13159 bases
Position: chr2:153027942-153041100
Accession: 1921783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0058139	zf-C2H2	PF00096.26	3.1e-34	1	6
MGP_129S1SvImJ_P0058139	zf-C2H2	PF00096.26	3.1e-34	2	6
MGP_129S1SvImJ_P0058139	zf-C2H2	PF00096.26	3.1e-34	3	6
MGP_129S1SvImJ_P0058139	zf-C2H2	PF00096.26	3.1e-34	4	6
MGP_129S1SvImJ_P0058139	zf-C2H2	PF00096.26	3.1e-34	5	6
MGP_129S1SvImJ_P0058139	zf-C2H2	PF00096.26	3.1e-34	6	6
MGP_129S1SvImJ_P0058139	zf-met	PF12874.7	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0058139	-	4232	XM_006500304	MGP_129S1SvImJ_P0058139	706 (aa)	XP_006500367	Q4VBD9
MGP_129S1SvImJ_T0058140	-	701	-	MGP_129S1SvImJ_P0058140	146 (aa)	-	-
MGP_129S1SvImJ_T0058141	-	734	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0026610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0026610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0026610	Gzf1	66	44.103	MGP_129S1SvImJ_G0029507	Zbtb49	62	46.479
MGP_129S1SvImJ_G0026610	Gzf1	64	37.349	MGP_129S1SvImJ_G0035448	Zfp651	51	37.349
MGP_129S1SvImJ_G0026610	Gzf1	83	39.568	MGP_129S1SvImJ_G0029048	Zbtb17	78	39.568
MGP_129S1SvImJ_G0026610	Gzf1	60	41.176	MGP_129S1SvImJ_G0020716	Zfp748	82	41.176
MGP_129S1SvImJ_G0026610	Gzf1	84	34.286	MGP_129S1SvImJ_G0016552	Zbtb41	54	34.286
MGP_129S1SvImJ_G0026610	Gzf1	51	46.193	MGP_129S1SvImJ_G0027122	Mynn	64	37.415