EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0026906 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 20827 bases
Position: chr2:172713688-172734514
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0059379	ResIII	PF04851.15	1.6e-06	1	1
MGP_129S1SvImJ_P0059379	DEAD	PF00270.29	7.1e-45	1	1
MGP_129S1SvImJ_P0059380	DEAD	PF00270.29	2.3e-18	1	1
MGP_129S1SvImJ_P0059381	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0059381	-	955	-	MGP_129S1SvImJ_P0059381	310 (aa)	-	-
MGP_129S1SvImJ_T0059380	-	2153	-	MGP_129S1SvImJ_P0059380	292 (aa)	-	-
MGP_129S1SvImJ_T0059383	-	649	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059382	-	264	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059384	-	708	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059379	-	2714	XM_006499422	MGP_129S1SvImJ_P0059379	760 (aa)	XP_006499485	Q921N6

Gene Model

Click here to download MGP_129S1SvImJ_G0026906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0026906's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0026906	Ddx27	51	35.938	MGP_129S1SvImJ_G0020049	Ddx24	56	35.938
MGP_129S1SvImJ_G0026906	Ddx27	53	38.221	MGP_129S1SvImJ_G0016412	Ddx18	61	38.462
MGP_129S1SvImJ_G0026906	Ddx27	59	33.696	MGP_129S1SvImJ_G0033699	Ddx49	97	38.286
MGP_129S1SvImJ_G0026906	Ddx27	54	32.134	MGP_129S1SvImJ_G0023633	Ddx39b	84	32.970
MGP_129S1SvImJ_G0026906	Ddx27	53	31.019	MGP_129S1SvImJ_G0018018	Ddx56	98	33.065
MGP_129S1SvImJ_G0026906	Ddx27	56	32.558	MGP_129S1SvImJ_G0022077	Ddx17	56	33.880
MGP_129S1SvImJ_G0026906	Ddx27	52	34.129	MGP_129S1SvImJ_G0017303	Ddx50	61	34.279