EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0027020 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 8648 bases
Position: chr2:187943611-187952258
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0059860	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0059859	-	1087	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059858	-	1822	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059862	-	748	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059864	-	434	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059865	-	555	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059863	-	662	-	MGP_129S1SvImJ_P0059863	62 (aa)	-	-
MGP_129S1SvImJ_T0059860	-	726	-	MGP_129S1SvImJ_P0059860	201 (aa)	-	-
MGP_129S1SvImJ_T0059861	-	835	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059857	-	2179	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0059856	-	2318	XM_011239965	MGP_129S1SvImJ_P0059856	121 (aa)	XP_011238267	Q8BXL7

Gene Model

Click here to download MGP_129S1SvImJ_G0027020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0027020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0027020	Arfrp1	93	33.929	MGP_129S1SvImJ_G0022932	Arl6	92	30.387
MGP_129S1SvImJ_G0027020	Arfrp1	93	38.793	MGP_129S1SvImJ_G0018393	Arf1	96	33.871
MGP_129S1SvImJ_G0027020	Arfrp1	85	34.286	MGP_129S1SvImJ_G0016288	Arl4c	86	34.286
MGP_129S1SvImJ_G0027020	Arfrp1	92	40.000	MGP_129S1SvImJ_G0025211	Arl3	96	40.000
MGP_129S1SvImJ_G0027020	Arfrp1	93	31.304	MGP_129S1SvImJ_G0031102	Arl8b	74	31.724
MGP_129S1SvImJ_G0027020	Arfrp1	91	38.182	MGP_129S1SvImJ_G0024751	Arl2	97	35.106
MGP_129S1SvImJ_G0027020	Arfrp1	90	38.393	MGP_129S1SvImJ_G0030508	Arf5	94	34.225
MGP_129S1SvImJ_G0027020	Arfrp1	93	40.708	MGP_129S1SvImJ_G0019046	Arl5c	96	37.705
MGP_129S1SvImJ_G0027020	Arfrp1	93	38.793	MGP_129S1SvImJ_G0019271	Arf2	96	33.333
MGP_129S1SvImJ_G0027020	Arfrp1	87	37.273	MGP_129S1SvImJ_G0021439	Arl11	94	34.659
MGP_129S1SvImJ_G0027020	Arfrp1	71	30.070	MGP_129S1SvImJ_G0016517	Arl8a	73	30.070
MGP_129S1SvImJ_G0027020	Arfrp1	84	40.196	MGP_129S1SvImJ_G0025366	Arl5b	92	37.126
MGP_129S1SvImJ_G0027020	Arfrp1	93	37.931	MGP_129S1SvImJ_G0022309	Arf3	96	33.333
MGP_129S1SvImJ_G0027020	Arfrp1	79	41.667	MGP_129S1SvImJ_G0017631	Arl1	91	34.066
MGP_129S1SvImJ_G0027020	Arfrp1	84	36.538	MGP_129S1SvImJ_G0027294	Arl14	83	35.503
MGP_129S1SvImJ_G0027020	Arfrp1	91	40.000	MGP_129S1SvImJ_G0019699	Arl4a	90	34.896
MGP_129S1SvImJ_G0027020	Arfrp1	93	38.938	MGP_129S1SvImJ_G0025734	Arl5a	97	38.587
MGP_129S1SvImJ_G0027020	Arfrp1	87	32.222	MGP_129S1SvImJ_G0019210	Arl4d	85	32.222