EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0060459	KH_1	PF00013.29	9e-17	1	2
MGP_129S1SvImJ_P0060459	KH_1	PF00013.29	9e-17	2	2
MGP_129S1SvImJ_P0060463	KH_1	PF00013.29	9.2e-17	1	2
MGP_129S1SvImJ_P0060463	KH_1	PF00013.29	9.2e-17	2	2
MGP_129S1SvImJ_P0060461	KH_1	PF00013.29	1.1e-16	1	2
MGP_129S1SvImJ_P0060461	KH_1	PF00013.29	1.1e-16	2	2
MGP_129S1SvImJ_P0060462	KH_1	PF00013.29	1.3e-16	1	2
MGP_129S1SvImJ_P0060462	KH_1	PF00013.29	1.3e-16	2	2
MGP_129S1SvImJ_P0060458	KH_1	PF00013.29	1.7e-16	1	2
MGP_129S1SvImJ_P0060458	KH_1	PF00013.29	1.7e-16	2	2
MGP_129S1SvImJ_P0060459	Agenet	PF05641.12	4.1e-15	1	2
MGP_129S1SvImJ_P0060459	Agenet	PF05641.12	4.1e-15	2	2
MGP_129S1SvImJ_P0060463	Agenet	PF05641.12	4.2e-15	1	2
MGP_129S1SvImJ_P0060463	Agenet	PF05641.12	4.2e-15	2	2
MGP_129S1SvImJ_P0060461	Agenet	PF05641.12	4.9e-15	1	2
MGP_129S1SvImJ_P0060461	Agenet	PF05641.12	4.9e-15	2	2
MGP_129S1SvImJ_P0060462	Agenet	PF05641.12	6.4e-15	1	2
MGP_129S1SvImJ_P0060462	Agenet	PF05641.12	6.4e-15	2	2
MGP_129S1SvImJ_P0060458	Agenet	PF05641.12	8.1e-15	1	2
MGP_129S1SvImJ_P0060458	Agenet	PF05641.12	8.1e-15	2	2
MGP_129S1SvImJ_P0060461	FXMRP1_C_core	PF12235.8	3.1e-46	1	1
MGP_129S1SvImJ_P0060458	FXMRP1_C_core	PF12235.8	4.1e-46	1	1
MGP_129S1SvImJ_P0060459	FXMRP1_C_core	PF12235.8	8.5e-29	1	2
MGP_129S1SvImJ_P0060459	FXMRP1_C_core	PF12235.8	8.5e-29	2	2
MGP_129S1SvImJ_P0060463	FXMRP1_C_core	PF12235.8	8.7e-29	1	2
MGP_129S1SvImJ_P0060463	FXMRP1_C_core	PF12235.8	8.7e-29	2	2
MGP_129S1SvImJ_P0060462	FXMRP1_C_core	PF12235.8	5.3e-28	1	2
MGP_129S1SvImJ_P0060462	FXMRP1_C_core	PF12235.8	5.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0060464	-	651	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0060465	-	646	-	MGP_129S1SvImJ_P0060465	132 (aa)	-	-
MGP_129S1SvImJ_T0060466	-	2489	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0060460	-	2157	-	MGP_129S1SvImJ_P0060460	54 (aa)	-	-
MGP_129S1SvImJ_T0060461	-	2126	-	MGP_129S1SvImJ_P0060461	568 (aa)	-	-
MGP_129S1SvImJ_T0060462	-	2128	-	MGP_129S1SvImJ_P0060462	621 (aa)	-	-
MGP_129S1SvImJ_T0060463	-	3012	-	MGP_129S1SvImJ_P0060463	539 (aa)	-	-
MGP_129S1SvImJ_T0060459	-	1656	-	MGP_129S1SvImJ_P0060459	536 (aa)	-	-
MGP_129S1SvImJ_T0060458	-	2387	XM_006535400	MGP_129S1SvImJ_P0060458	677 (aa)	XP_006535463	Q61584

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0027148	Fxr1	99	66.490	MGP_129S1SvImJ_G0018542	Fxr2	98	62.737
MGP_129S1SvImJ_G0027148	Fxr1	81	73.653	MGP_129S1SvImJ_G0035772	Fmr1	85	65.613