EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0027549 (Gene tree)
Gene ID: -
Gene Symbol: Tdrkh
Alias: 2700091C21Rik|Tdrd2
Full Name: tudor and KH domain containing protein
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 18225 bases
Position: chr3:94986627-95004851
Accession: 1919884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0062197	KH_1	PF00013.29	1.9e-34	1	2
MGP_129S1SvImJ_P0062197	KH_1	PF00013.29	1.9e-34	2	2
MGP_129S1SvImJ_P0062195	KH_1	PF00013.29	1.2e-33	1	2
MGP_129S1SvImJ_P0062195	KH_1	PF00013.29	1.2e-33	2	2
MGP_129S1SvImJ_P0062199	KH_1	PF00013.29	5.8e-28	1	2
MGP_129S1SvImJ_P0062199	KH_1	PF00013.29	5.8e-28	2	2
MGP_129S1SvImJ_P0062198	KH_1	PF00013.29	3e-19	1	1
MGP_129S1SvImJ_P0062198	TUDOR	PF00567.24	4.7e-29	1	1
MGP_129S1SvImJ_P0062199	TUDOR	PF00567.24	5.3e-29	1	1
MGP_129S1SvImJ_P0062195	TUDOR	PF00567.24	5.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0062198	-	2478	-	MGP_129S1SvImJ_P0062198	515 (aa)	-	-
MGP_129S1SvImJ_T0062199	-	2588	-	MGP_129S1SvImJ_P0062199	556 (aa)	-	-
MGP_129S1SvImJ_T0062196	-	476	-	MGP_129S1SvImJ_P0062196	50 (aa)	-	-
MGP_129S1SvImJ_T0062197	-	1231	-	MGP_129S1SvImJ_P0062197	296 (aa)	-	-
MGP_129S1SvImJ_T0062195	-	1796	XM_006502138	MGP_129S1SvImJ_P0062195	560 (aa)	XP_006502201	Q80VL1

Gene Model

Click here to download MGP_129S1SvImJ_G0027549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0027549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0027549	Tdrkh	52	30.625	MGP_129S1SvImJ_G0030721	Igf2bp3	55	30.625
MGP_129S1SvImJ_G0027549	Tdrkh	74	31.707	MGP_129S1SvImJ_G0025586	Fubp3	79	31.707