EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0027553 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 13870 bases
Position: chr3:95057305-95071174
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0062216	RRM_1	PF00076.22	9.3e-54	1	3
MGP_129S1SvImJ_P0062216	RRM_1	PF00076.22	9.3e-54	2	3
MGP_129S1SvImJ_P0062216	RRM_1	PF00076.22	9.3e-54	3	3
MGP_129S1SvImJ_P0062215	RRM_1	PF00076.22	1.5e-53	1	3
MGP_129S1SvImJ_P0062215	RRM_1	PF00076.22	1.5e-53	2	3
MGP_129S1SvImJ_P0062215	RRM_1	PF00076.22	1.5e-53	3	3
MGP_129S1SvImJ_P0062217	RRM_1	PF00076.22	2e-53	1	3
MGP_129S1SvImJ_P0062217	RRM_1	PF00076.22	2e-53	2	3
MGP_129S1SvImJ_P0062217	RRM_1	PF00076.22	2e-53	3	3
MGP_129S1SvImJ_P0062222	RRM_1	PF00076.22	6.9e-16	1	1
MGP_129S1SvImJ_P0062223	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0062224	-	3358	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0062225	-	889	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0062226	-	855	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0062215	-	2747	-	MGP_129S1SvImJ_P0062215	465 (aa)	-	-
MGP_129S1SvImJ_T0062214	-	365	XM_006502323	MGP_129S1SvImJ_P0062214	31 (aa)	XP_006502386	Q8CIN6
MGP_129S1SvImJ_T0062217	-	4079	-	MGP_129S1SvImJ_P0062217	494 (aa)	-	-
MGP_129S1SvImJ_T0062216	-	2354	-	MGP_129S1SvImJ_P0062216	416 (aa)	-	-
MGP_129S1SvImJ_T0062219	-	669	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0062218	-	1193	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0062223	-	726	-	MGP_129S1SvImJ_P0062223	231 (aa)	-	-
MGP_129S1SvImJ_T0062222	-	779	-	MGP_129S1SvImJ_P0062222	182 (aa)	-	-
MGP_129S1SvImJ_T0062220	-	2444	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0062221	-	2935	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0027553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0027553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0027553	Celf3	80	37.500	MGP_129S1SvImJ_G0023139	Pabpc6	71	36.585
MGP_129S1SvImJ_G0027553	Celf3	81	87.368	MGP_129S1SvImJ_G0034902	Celf6	75	85.526
MGP_129S1SvImJ_G0027553	Celf3	99	45.783	MGP_129S1SvImJ_G0025332	Celf2	94	83.333
MGP_129S1SvImJ_G0027553	Celf3	61	40.741	MGP_129S1SvImJ_G0028576	Elavl4	85	40.741
MGP_129S1SvImJ_G0027553	Celf3	100	67.213	MGP_129S1SvImJ_G0017560	Celf5	93	76.744
MGP_129S1SvImJ_G0027553	Celf3	70	34.091	MGP_129S1SvImJ_G0033083	Tial1	81	37.333
MGP_129S1SvImJ_G0027553	Celf3	99	43.830	MGP_129S1SvImJ_G0026137	Celf1	97	43.320
MGP_129S1SvImJ_G0027553	Celf3	67	32.857	MGP_129S1SvImJ_G0026834	Pabpc1l	57	34.118
MGP_129S1SvImJ_G0027553	Celf3	63	41.975	MGP_129S1SvImJ_G0028445	Elavl2	76	41.975
MGP_129S1SvImJ_G0027553	Celf3	94	40.278	MGP_129S1SvImJ_G0035401	Rbms3	81	39.474
MGP_129S1SvImJ_G0027553	Celf3	76	38.462	MGP_129S1SvImJ_G0030975	Tia1	93	38.667
MGP_129S1SvImJ_G0027553	Celf3	100	69.072	MGP_129S1SvImJ_G0024209	Celf4	97	65.971
MGP_129S1SvImJ_G0027553	Celf3	98	35.632	MGP_129S1SvImJ_G0033333	Elavl1	95	44.444
MGP_129S1SvImJ_G0027553	Celf3	98	35.632	MGP_129S1SvImJ_G0034474	Elavl3	89	34.940
MGP_129S1SvImJ_G0027553	Celf3	69	33.784	MGP_129S1SvImJ_G0028739	Pabpc4	50	32.394