EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0027718 (Gene tree)
Gene ID: -
Gene Symbol: Ddx20
Alias: Dp103|GEMIN3|Gemin3|dp103
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 9217 bases
Position: chr3:107053163-107062379
Accession: 1858415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0062999	ResIII	PF04851.15	3.2e-06	1	1
MGP_129S1SvImJ_P0062999	DEAD	PF00270.29	6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0062999	-	2905	XM_006501701	MGP_129S1SvImJ_P0062999	825 (aa)	XP_006501764	Q9JJY4
MGP_129S1SvImJ_T0063001	-	2257	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0063000	-	1264	-	MGP_129S1SvImJ_P0063000	139 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0027718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0027718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0027718	Ddx20	50	34.140	MGP_129S1SvImJ_G0033839	Ddx39	90	34.074
MGP_129S1SvImJ_G0027718	Ddx20	50	32.767	MGP_129S1SvImJ_G0034714	Ddx6	79	33.419