EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_129S1SvImJ_G0027826 (Gene tree)
Gene ID
-
Gene Symbol
Ptbp2
Alias
Brptb|Nptb|Ptb2|brPTB|nPTB
Full Name
polypyrimidine tract binding protein 2
Gene Type
protein_coding
Species
Mus_musculus_129s1svimj
Status
putative
Strand
Minus strand
Length
71106 bases
Position
chr3:121829388-121900493
Accession
1860489
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_129S1SvImJ_P0063453RRM_5PF13893.63.4e-5313
MGP_129S1SvImJ_P0063453RRM_5PF13893.63.4e-5323
MGP_129S1SvImJ_P0063453RRM_5PF13893.63.4e-5333
MGP_129S1SvImJ_P0063452RRM_5PF13893.64e-5212
MGP_129S1SvImJ_P0063452RRM_5PF13893.64e-5222
MGP_129S1SvImJ_P0063458RRM_5PF13893.63.4e-2011
MGP_129S1SvImJ_P0063452RRM_1PF00076.225.9e-3313
MGP_129S1SvImJ_P0063452RRM_1PF00076.225.9e-3323
MGP_129S1SvImJ_P0063452RRM_1PF00076.225.9e-3333
MGP_129S1SvImJ_P0063453RRM_1PF00076.222e-3213
MGP_129S1SvImJ_P0063453RRM_1PF00076.222e-3223
MGP_129S1SvImJ_P0063453RRM_1PF00076.222e-3233
MGP_129S1SvImJ_P0063460RRM_1PF00076.222.5e-1011
MGP_129S1SvImJ_P0063458RRM_1PF00076.220.0002311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_129S1SvImJ_T0063462-478--- (aa)--
MGP_129S1SvImJ_T0063464-389-MGP_129S1SvImJ_P006346449 (aa)--
MGP_129S1SvImJ_T0063461-654--- (aa)--
MGP_129S1SvImJ_T0063458-465-MGP_129S1SvImJ_P0063458155 (aa)--
MGP_129S1SvImJ_T0063459-4047--- (aa)--
MGP_129S1SvImJ_T0063460-1742-MGP_129S1SvImJ_P0063460241 (aa)--
MGP_129S1SvImJ_T0063454-1598-MGP_129S1SvImJ_P0063454356 (aa)--
MGP_129S1SvImJ_T0063455-576-MGP_129S1SvImJ_P006345533 (aa)--
MGP_129S1SvImJ_T0063456-937--- (aa)--
MGP_129S1SvImJ_T0063457-491--- (aa)--
MGP_129S1SvImJ_T0063463-454--- (aa)--
MGP_129S1SvImJ_T0063452-3777XM_006501731MGP_129S1SvImJ_P0063452531 (aa)XP_006501794Q91Z31
MGP_129S1SvImJ_T0063453-3364-MGP_129S1SvImJ_P0063453532 (aa)--
Gene Model
Click here to download MGP_129S1SvImJ_G0027826's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0027826's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_129S1SvImJ_G0027826Ptbp29969.835MGP_129S1SvImJ_G0028336Ptbp39178.195
MGP_129S1SvImJ_G0027826Ptbp27730.645MGP_129S1SvImJ_G0031962Hnrnpl7730.645
MGP_129S1SvImJ_G0027826Ptbp29930.357MGP_129S1SvImJ_G0024055Hnrnpll5730.000

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